Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2517 ATGAAACCCAAATATCCTACTGCCTCTTTCTTCCTCTTCTTCTACCTCTCCTTTCTTTCTCTACCTTCATGCTCTGCTTCTTTTTCAGCTTCCACAGACTCCACTCAGCAACTGATCAACTTTAAAGCTTCTCTTCCAAACCCGTCTGCACTCCAAAATTGGCTCCCGAATCAGAACCCGTGTTCCTTCACTGGGATTTCCTGCAACGAATCCCAGGTTTCTTCCATAGACCTCAGTTTCATCTCCTTGAGCACAAATTTCAGTGTTGTCTCTGCCTATCTTCTCACACTTGACCACTTGGAGACTCTTACTCTGACATCCACCCATCTTTCTGGGGCCATTTCTGAACTCCCACCTGAGTTCAAGTGTGGCGCCTCATTGACCACCATAGATCTATCCCAGAACGCTTTGTCTGGATCTGTTTCAGATCTATCCTACTACCTGGCCTCTTGTTTGAGCTTGAAATCTCTCAACCTTTCGAATAATATTCTTGAGTTTTCGGGGAAAGATTCAAGCGGTTTAAGGCTCAATCTTCAAGTCCTCGATATGTCTATCAATAAGATATCGGGTCCGAACCTTTTACCCTGGATCTTATCTCGAGGTTGCGACGACATGCGCGTCTTGGCTCTCAGAGGAAACAGAATCACCGGAGAAATCAACTTGTCGAATTGCCAGAAATTGGAGCGTTTAGACCTTTCTTCTAACAATTTCTCTGTGGCTGTTCCTTCGCTCGGCGAATGTTCGGCGCTCGAGTACCTTGACCTCTCTGCCAACAAGTATTTCGGCAACATTGGCCTCGTTGTCTCCCCCTGCAGGCTGCTCAGCTATCTCAACATTTCAAGCAATGAGTTCTCCGGTCCGGTTCCGTCGCTTCCCGTGGGTTCTCTGCAGTACGTTTATCTTGCAAGCAACAATTTCCACGGTCAAATTCCTGCGCGACTCCTCGATTTGTGCTCCACTCTGGTCGAGCTCGATCTTTCCCGGAACCAACTCTCCGGCATGGTTCCGAGCGGTTTGAGCGAGTGTTCTTCCCTGAGATTGCTTGATATATCTGGCAACAGGTTTTCTGGTGAATTACCGGTTGGAATTTTCATGGAGATGAGCAGCTTGAAGAAGCTCGTTCTTTCGTTCAATGATTTCGTCGGTAATTTGCCTGAGAAGTTGTCGAAGCTCGTGAGCTTGGAATCGTTGGATCTGAGTTCCAATAACTTCACAGGGTCGATACCTAGTGGACTGTGTCAAGATCCTAGGAATAATTTGAAAGAACTGTTTCTACAGAATAATCAGCTCATGGGCTCTATTCCATCCACACTCAGTAACTGTTCTCAGCTTGTCTCGTTGGATTTAAGTTTCAACTTCCTGACGGGGACTATCCCTTCCAGCTTAGGGTCTCTTTCGAAGCTCCGTGATTTGATCATTTGGCTCAATCAGCTTGGTGGCGAAATACCTCAAGAGCTCATGTACATCAAGACCCTTGAGAATTTGATTTTGGACTTCAATGAGTTGACAGGAAACATTCCTTCTGGCCTTAGCAACTGCACCAACATGAACTGGATCTCCTTGTCGAACAACAGGTTGAGCGGGGAGATTCCGGCTTGGATTGGTCAGCTTTCCAATCTTGCAATCCTGAAACTGAGCAATAACTCGTTCTCCGGGAGGATTCCGCCTGAGCTTGGTGATTGTCATAGCCTGATATGGTTGGATCTAAATACAAATTTGTTGAATGGGTCAATTCCTCCTGAGTTGTTTAAGCAATCTGGAAAAATTGCAGTGAATTTCATAAGCGGGAAAACTTACGTGTATATCAAGAATGATGGCAGTAAGGAGTGTCATGGAGCTGGGAATTTATTAGAGTTTGCTGGGATCAGTCAGGAGCAGTTGAACAGAATCTCAACCAGGAACCCCTGCAATTTCACTAGGGTTTATGGAGGTAAGATCCAACCTACATTTAACCATAATGGTTCTATGATTTTTTTGGATATTTCACACAATATGTTATCGGGTAGTATACCGAAGGAGATTGGGAGCATGTACTATTTATACATTTTGCATTTGGGCCACAATGGTATATCTGGAAATATCCCACAAGAGCTCGGAAGCTTGACAAATCTCAACATACTTGATCTCTCCCACAATAAGCTTGAAGGTCAAATTCCACAGACCTTGACAGGCCTTTCCATGCTCAACGATATTGATCTGTCATACAACTCTCTATGGGGAGTGATTCCTGAATCTGGTCAGTTTGAAACCTTTCCCCCTTACAGATTCGCAAACAACTCTGGTCTTTGCGGATACCCTCTTGCTCGATGTGGGACGGACTCAGGATTAGGAGCAAGTGCCCTGCATCAGAAGTCTCACAAGAGACAGGCATCTCTTGCAGGGAGTGTGGCCATGGGACTGCTATTCTCCCTCTTCTGCATCTTTGGTTTGATTATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTACCCTTGATGTCTACATTGACAACAATTCTCATTCAGGTACAGCCAATAACGTGAGCTGGAAGCTCACTAGTGCCCGTGAAGCGCTTAGCATCAACCTTGCAACATTTGAGAAGCCCCTCCGGAAACTTACTTTTGCAGATCTTCTTGAAGCTACTAACGGCTTTCACAATGACAGTCTTATTGGTTCTGGTGGTTTTGGTGACGTCTACAAGGCTCAATTGAAGGATGGAAGTATTGTGGCCATCAAGAAACTGATACATATTAGCGGGCAGGGTGACAGGGAATTCACTGCTGAAATGGAAACCATAGGAAAAATCAAGCATCGAAACCTTGTTCCCCTTCTGGGTTACTGCAAGGTTGGAGAAGAAAGACTCTTGGTTTATGATTACATGAAATACGGAAGTCTAGAAGATGTTTTGCATGACCCGAAGGAAGCTGGGGTCAAACTGAACTGGGTAATAAGGAGGAAAATTGCCATTGGGGCTGCCAGGGGATTGGCTTTTCTTCACCATAATTGCATCCCACACATCATTCATAGAGACATGAAGTCAAGTAATGTATTGCTCGATGAAAATTTGGAAGCCAGAGTCTCTGATTTTGGAATGGCTAGGCTCATGAGTGCTATGGATACCCACTTAAGTGTCAGCACACTAGCAGGCACTCCTGGCTATGTTCCTCCTGAATATTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGCTATGGTGTAGTTTTACTGGAGCTTCTAACAGGGAGAAGACCGACGGATTCAGCTGATTTTGGGGATAACAATCTCGTGGGATGGGTTAAACAACATGCCAAACTGAAAATAAGTGATGTTTTTGATCCAGAGCTCATGAAAGAGGACCCTAATCTTGAGATTGAGCTCTTACAGCACCTAAAGGTTGCTTGTGCTTGTTTGGATGATCGACCTTGGCGGCGTCCCACGATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAAGCCGGGTCTGGGATTGATTCCCAATCCACCATAGCCACTGATGATGGAGGTTTTGGTGCAGTTGAAATGGTAGAGATGAGCATAAAAGAAGCCCCTGAGTTCAGCAAGCCTTAG 3585 0.4508 MKPKYPTASFFLFFYLSFLSLPSCSASFSASTDSTQQLINFKASLPNPSALQNWLPNQNPCSFTGISCNESQVSSIDLSFISLSTNFSVVSAYLLTLDHLETLTLTSTHLSGAISELPPEFKCGASLTTIDLSQNALSGSVSDLSYYLASCLSLKSLNLSNNILEFSGKDSSGLRLNLQVLDMSINKISGPNLLPWILSRGCDDMRVLALRGNRITGEINLSNCQKLERLDLSSNNFSVAVPSLGECSALEYLDLSANKYFGNIGLVVSPCRLLSYLNISSNEFSGPVPSLPVGSLQYVYLASNNFHGQIPARLLDLCSTLVELDLSRNQLSGMVPSGLSECSSLRLLDISGNRFSGELPVGIFMEMSSLKKLVLSFNDFVGNLPEKLSKLVSLESLDLSSNNFTGSIPSGLCQDPRNNLKELFLQNNQLMGSIPSTLSNCSQLVSLDLSFNFLTGTIPSSLGSLSKLRDLIIWLNQLGGEIPQELMYIKTLENLILDFNELTGNIPSGLSNCTNMNWISLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCHSLIWLDLNTNLLNGSIPPELFKQSGKIAVNFISGKTYVYIKNDGSKECHGAGNLLEFAGISQEQLNRISTRNPCNFTRVYGGKIQPTFNHNGSMIFLDISHNMLSGSIPKEIGSMYYLYILHLGHNGISGNIPQELGSLTNLNILDLSHNKLEGQIPQTLTGLSMLNDIDLSYNSLWGVIPESGQFETFPPYRFANNSGLCGYPLARCGTDSGLGASALHQKSHKRQASLAGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKEATLDVYIDNNSHSGTANNVSWKLTSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSIVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYDYMKYGSLEDVLHDPKEAGVKLNWVIRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNLEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIATDDGGFGAVEMVEMSIKEAPEFSKP 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2517 1194 ProSitePatterns Protein kinases ATP-binding region signature. 887 910 IPR017441 GO:0005524
Bisa08g2517 1194 Gene3D Phosphorylase Kinase; domain 1 841 956 - -
Bisa08g2517 1194 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Bisa08g2517 1194 Gene3D Ribonuclease Inhibitor 38 770 IPR032675 -
Bisa08g2517 1194 Gene3D Transferase(Phosphotransferase) domain 1 957 1158 - -
Bisa08g2517 1194 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 416 598 - -
Bisa08g2517 1194 SUPERFAMILY RNI-like 176 409 - -
Bisa08g2517 1194 FunFam Brassinosteroid LRR receptor kinase 957 1158 - -
Bisa08g2517 1194 SUPERFAMILY L domain-like 51 219 - -
Bisa08g2517 1194 Pfam Leucine rich repeat 295 355 IPR001611 GO:0005515
Bisa08g2517 1194 Pfam Leucine rich repeat 680 738 IPR001611 GO:0005515
Bisa08g2517 1194 SUPERFAMILY Protein kinase-like (PK-like) 867 1157 IPR011009 -
Bisa08g2517 1194 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 419 1154 - -
Bisa08g2517 1194 SUPERFAMILY L domain-like 418 769 - -
Bisa08g2517 1194 Pfam Brassinosteroid receptor island domain 587 651 IPR045381 -
Bisa08g2517 1194 SMART serkin_6 881 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2517 1194 SMART LRR_typ_2 318 342 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 562 585 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 391 415 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 97 123 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 419 441 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 725 748 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 701 724 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 537 561 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 293 317 IPR003591 -
Bisa08g2517 1194 SMART LRR_typ_2 224 247 IPR003591 -
Bisa08g2517 1194 FunFam Serine/threonine-protein kinase BRI1-like 1 594 651 - -
Bisa08g2517 1194 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 176 415 - -
Bisa08g2517 1194 CDD STKc_IRAK 887 1156 - -
Bisa08g2517 1194 ProSiteProfiles Protein kinase domain profile. 881 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2517 1194 FunFam serine/threonine-protein kinase BRI1-like 2 842 956 - -
Bisa08g2517 1194 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 648 770 - -
Bisa08g2517 1194 Pfam Leucine Rich Repeat 444 465 IPR001611 GO:0005515
Bisa08g2517 1194 Pfam Leucine Rich Repeat 393 412 IPR001611 GO:0005515
Bisa08g2517 1194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Bisa08g2517 1194 Pfam Protein kinase domain 881 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2517 1194 PRINTS Leucine-rich repeat signature 321 334 - -
Bisa08g2517 1194 PRINTS Leucine-rich repeat signature 701 714 - -
Bisa08g2517 1194 Gene3D - 592 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2517 Bisa-ChrBisa08 59248341 59251925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2517 36 1190 Receptor kinase-like Gene Family AT4G39400 71.109 0.0 1602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa08g2517 Pkinase 1e-44 CL0016