Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2514 ATGGGATGCGTTTTCAGCACGGCTACTCCCTCTCCTAAATATGTGAGGTCAAAAAGGGGAGATAAGAATGCGAGAAGAAGTAGTGTATCTAAGCCAAACGGAGAGAAAATTCGAAGGACAGAGTCCAACAGTAAGCGCGTGAGGTTGGAACTGGAGGCAAAGACTGTGAGAAATGGGCGTAGGGTTTCAAGTACTGTGAATGCTGCTAAAGCGGGTACCGGAGTAGGAGTGGGAGGAGAAAGGGCGGTAGGACGTGGAACATATAGCAATGTGTACAAAGCCAGGGATAAGGATACAGGAAAAATTGTTGCTTTGAAGAAGGTACGATTTAACACATCAGATTCTGAAAGTATCAAGTTCATGGCTAGAGAGATCATGATACTGCAAATGCTTGATCATCCCAATGTCATCAAGCTTGAAGGACTTGCTACATCAAGGTTGCAATATAGTCTTTATCTAGTTTTTGATTTTATGCAGTCAGACTTATCTCGAATTATCTGTCATCCTGGGAAGAGACTCACTGAAGCACAGATCAAGCGCTATATGCTGCAACTGCTTTCTGGCCTCCAGCATTGCCATGACAAGGGAGTTATGCATCGTGATATTAAATCTTCTAACTTGTTAATAGACAAAAGAGGGGTGCTGAAAATTGCAGACTTTGGGCTTGCAAATTCTTTTGCTCTTAAACCTGAAGGACCTTTTACAAATCGGGTTGTGACACTCTGGTATAGGGCTCCTGAACTACTTTTAGGTTCAACAGATTATGGATTTGGCATTGATCTATGGAGTGCAGGATGCCTATTGGCGGAGATGTTTGTTGGAAGGCCAATTATGCCTGGGAGGACAGAGATTGAGCAGCTTCACATGATCTTCAAACTTTGTGGTTCTCCTTCGGGTGATTACTGGAAAAAGTTGAAGCTAATGACAAGTTATCGACCGCCACGGCACTACAAACCAAGTTATGAACAAGCCTTCCGGTATTTTCCTTCCTCTTCCATTGGTCTCTTGACCACGCTTCTTGATCTGGACCCTTCCTATCGTGGCAGTGCTGCATCTGCTCTTCAAAGTGAAGTAAGCTCTTTTCTCCTCGTTGCTAATCATGTGTTGTTGCTTTCTTGGTCTTTCTTCGACGCTAGTCCATTAGCATGTGAGCTTTCAACGTTATCAGGAGTCCACAAAGATGAGGATGAGCTCTCACAAACTAAAAAACACAAAAGTCAAAGGCCTTTGAGAAGAGGCCAATCTCAAGCAAGTAATGTACGTCAGTCAGGAAAGAAGCAAATTGCTGAACAACCCAGAAGAGGTTCTGAATCGATCAAAGAGGAGGACATGCATGGGCAAGAAACAGGCAATACTGCAAGCGGTAGTTCCTCAGCTTCCTCGTCGAGTGAGAAAAAATGGCCCAGAACTGATGCGCATCCTGGTGCTCTAAGGAACATAAAGAACTACAGAGCCCTCCTACAAGCCTCTGTGATGGATGCCATCAATCGCAAAGATGGCAATGAATTGGGTCAACTGCGCAGGTCCTTTTGTGCGTTGAATTTGCGACTTAATCCGGACTAG 1563 0.444 MGCVFSTATPSPKYVRSKRGDKNARRSSVSKPNGEKIRRTESNSKRVRLELEAKTVRNGRRVSSTVNAAKAGTGVGVGGERAVGRGTYSNVYKARDKDTGKIVALKKVRFNTSDSESIKFMAREIMILQMLDHPNVIKLEGLATSRLQYSLYLVFDFMQSDLSRIICHPGKRLTEAQIKRYMLQLLSGLQHCHDKGVMHRDIKSSNLLIDKRGVLKIADFGLANSFALKPEGPFTNRVVTLWYRAPELLLGSTDYGFGIDLWSAGCLLAEMFVGRPIMPGRTEIEQLHMIFKLCGSPSGDYWKKLKLMTSYRPPRHYKPSYEQAFRYFPSSSIGLLTTLLDLDPSYRGSAASALQSEVSSFLLVANHVLLLSWSFFDASPLACELSTLSGVHKDEDELSQTKKHKSQRPLRRGQSQASNVRQSGKKQIAEQPRRGSESIKEEDMHGQETGNTASGSSSASSSSEKKWPRTDAHPGALRNIKNYRALLQASVMDAINRKDGNELGQLRRSFCALNLRLNPD 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2514 520 FunFam Mitogen-activated protein kinase 158 361 - -
Bisa08g2514 520 FunFam probable serine/threonine-protein kinase At1g54610 79 159 - -
Bisa08g2514 520 PANTHER CELL DIVISION PROTEIN KINASE 82 358 - -
Bisa08g2514 520 Pfam Protein kinase domain 81 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2514 520 Gene3D Transferase(Phosphotransferase) domain 1 160 363 - -
Bisa08g2514 520 MobiDBLite consensus disorder prediction 15 44 - -
Bisa08g2514 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Bisa08g2514 520 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Bisa08g2514 520 MobiDBLite consensus disorder prediction 1 44 - -
Bisa08g2514 520 MobiDBLite consensus disorder prediction 411 426 - -
Bisa08g2514 520 MobiDBLite consensus disorder prediction 427 447 - -
Bisa08g2514 520 MobiDBLite consensus disorder prediction 393 475 - -
Bisa08g2514 520 SUPERFAMILY Protein kinase-like (PK-like) 82 356 IPR011009 -
Bisa08g2514 520 MobiDBLite consensus disorder prediction 448 465 - -
Bisa08g2514 520 ProSiteProfiles Protein kinase domain profile. 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2514 520 Gene3D Phosphorylase Kinase; domain 1 79 159 - -
Bisa08g2514 520 SMART serkin_6 77 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2514 Bisa-ChrBisa08 59204305 59208002 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2514 83 408 Core Cell Cycle Gene Families AT5G10270 42.733 3.73e-84 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa08g2514 Pkinase 2.7e-66 CL0016