Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2512 ATGGGATGCGTTTTCGGCAAGGATTCTGCCTCTCCTAAATCAACGAGGTCAAAACGGGGAAATAGGAATGAGAGAAGTAGTGATAAGGCTGTGACTTTGAGAAATGAACGTGAGGTTTCAAGTACTGTGAATGCTGCTGACGCGGGTGAGGGAGTAGGAGTAGGAGGAGAAAGGGCGGTTGCAAGAGAAGAGAAGAGTCAAGTAGGGAATGTTTCAAAGTGGTTTGTGGGGAAAAAGATTGGAAAAGATGAATTTTTGAATGGGTGGCGAAGGTGGCTGGTTGATAATATCCCCAGTGATGTTTTGGCTGGTCTGGTTCCGAGAAGTGCGGATTCATACGAGATGCTTGCCAAGATCAAGTGCTATATGTTGCAGCTGCTTTCTGGCCTCCGACATTGCCATGAGAGAGGAGTTATGCATCGTGATATTAAAGCTTCTAACTTGTTAATAGACAACAGAGGGGTGCTGAAAATGGCAGATTTTGGGATTGCATGTTCTATTTCTCTTAAATCTAAAGGGCCTCTTACAAATCGAGTTGGGACGCTCTGGTTTAGGGCTCCTGAACTACTTTTAGGTTCAAAAGATTATGGATTTGACATAGATCTATGGAGTGCAGGATGCCTATTGGCTGAAATGTTTGTTGGAAGGCCAATTATGTCTGGGAGGACAGAGATTGAACAGCTTCACTTGATCTTCAAACTTTGTGGTTCTCCTCCGGATGATTACTGGAAAAAGTTGAAGTTAATGAAAAGTTATCAAATCCGACATTACAAACCTAATTATGAACAAGCCTTTCAGGATTTTCCTTCCTCTTGCCTTGGTCTCTTGACCATGCTTCTTGATCTGGACCCTTCCCGTCGTGGCACTGCTGCATCTGCTCTTCGAAATGAAGAATCTACAAAGATTAGGAGTATGAGCGCTCACAAACTAAAAGACACAAAAGGGAAGAAGCAAATTGCTGAACAACCCAGAAGAGGTTCTGCATCGTTCAAAGAGGATAAGACTGTGGAACCCAAAATGCATGGGCAAGAAACAGGCAATAGTGCAAGCAGTAGTTCCTCAACTTCTTTCTCGAGTGAGAAAGAATGGCTCAGAATTGAAGGGCATCCTTTTTATTTTTCTGATCAGACTGATGCGCATCGTAATGCTCTAAAGAACATGAAGAACTTCAGCGCCTTCTTCCAGGCGTCTACGGTAGATACCATCAATCGTAAAGAAAGGAATGAATTGAGTCAACTGCGCAAGTCCTTTTCTGCGTTGAATTTTTGA 1269 0.4318 MGCVFGKDSASPKSTRSKRGNRNERSSDKAVTLRNEREVSSTVNAADAGEGVGVGGERAVAREEKSQVGNVSKWFVGKKIGKDEFLNGWRRWLVDNIPSDVLAGLVPRSADSYEMLAKIKCYMLQLLSGLRHCHERGVMHRDIKASNLLIDNRGVLKMADFGIACSISLKSKGPLTNRVGTLWFRAPELLLGSKDYGFDIDLWSAGCLLAEMFVGRPIMSGRTEIEQLHLIFKLCGSPPDDYWKKLKLMKSYQIRHYKPNYEQAFQDFPSSCLGLLTMLLDLDPSRRGTAASALRNEESTKIRSMSAHKLKDTKGKKQIAEQPRRGSASFKEDKTVEPKMHGQETGNSASSSSSTSFSSEKEWLRIEGHPFYFSDQTDAHRNALKNMKNFSAFFQASTVDTINRKERNELSQLRKSFSALNF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2512 422 MobiDBLite consensus disorder prediction 12 35 - -
Bisa08g2512 422 FunFam Mitogen-activated protein kinase 112 308 - -
Bisa08g2512 422 Gene3D Transferase(Phosphotransferase) domain 1 113 334 - -
Bisa08g2512 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bisa08g2512 422 PANTHER CELL DIVISION PROTEIN KINASE 114 297 - -
Bisa08g2512 422 MobiDBLite consensus disorder prediction 341 355 - -
Bisa08g2512 422 Pfam Protein kinase domain 118 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2512 422 SUPERFAMILY Protein kinase-like (PK-like) 117 296 IPR011009 -
Bisa08g2512 422 SMART serkin_6 33 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2512 422 MobiDBLite consensus disorder prediction 291 355 - -
Bisa08g2512 422 MobiDBLite consensus disorder prediction 301 340 - -
Bisa08g2512 422 ProSiteProfiles Protein kinase domain profile. 1 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2512 422 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2512 Bisa-ChrBisa08 59191411 59195129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2512 102 297 Core Cell Cycle Gene Families AT5G64960 49.500 6.34e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa08g2512 Pkinase 3.2e-42 CL0016