Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2508 ATGCCAATCGTATTTCCAGGCATGAACAGAGACAGGGAGATGTCCGCCATGGTATCTGCCTTGACCCACGTCGTCGCCGGCGACCTTCCTCCGGACTCCGCCGCAGGAGGCGCTGTTATGTTGAACGCGCCGTCGGATTCGGCGACACCTTCTTCGTCTTCTTCGTCTTACGGTGCCAGTTCTGCCCTGAAAAGAAGCAGAGAAGATTATAGTAATATTAATGCATCCTTTCGAAATACCTCTCATGGATCTTCTTCCCCAGCTATTATTCAAACAATTTCAGATAATTCAAGAGCAGAAATAAGCCAACTGGGAAACAGTGCGGTGTACGAATACAGCAGAAGCAACACCGAGACGGTGAGAGACGAAGGAAGAAGAAAGTACAGAGGCGTGAGGCAGAGGCCGTGGGGCAAGTGGGCCGCCGAGATCCGAGACCCTTTCAAGGCGGCGCGAGTGTGGCTCGGCACCTTCGACACCGCCGAAGCTGCCGCCCGAGCCTACGACGAAGCCGCCCTCCGTTTCCGGGGCAACAAGGCCAAGCTCAACTTCCCCGAAAACGTCCGCCTCCGCGACCCCCCGCCGCAGCCTCCGCCGCTGACGACAACCCATTTCGGGATTTCCGGTCCTGCGAGTGCCCCTTTGTCCGTTCCGACGTCCACCGAGCCGCTCGTTCGTACGGAACCTGTTCGTGAAATGGTTCAGGGCTCGCCGGGTGCGGGTGTGAATGTGAGTGATTTGTATGGCTATCCGCAGATTTCGGAGTTTCCGGGGAATCTGTACGATCAGATGGTTGTGTCGCCGACAATGGGCTATCGTTTTCAGTCATCGTTGTCGACATTGTCGGGTTCGTCGTCTTCGTCCTCTGCGCTGGATTCGTCTATGGATTATTCGCAGGGCGGTTCGGGTTTGGCAGGTCGGTTGAGGCCAGTGATGGGTCAAAGAAGTGGTTCAGAGTACGGACCGTGGACGGCTTCGGGTCAGAGTTCATCTTCATCTGGATGA 1002 0.5609 MPIVFPGMNRDREMSAMVSALTHVVAGDLPPDSAAGGAVMLNAPSDSATPSSSSSSYGASSALKRSREDYSNINASFRNTSHGSSSPAIIQTISDNSRAEISQLGNSAVYEYSRSNTETVRDEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRDPPPQPPPLTTTHFGISGPASAPLSVPTSTEPLVRTEPVREMVQGSPGAGVNVSDLYGYPQISEFPGNLYDQMVVSPTMGYRFQSSLSTLSGSSSSSSALDSSMDYSQGGSGLAGRLRPVMGQRSGSEYGPWTASGQSSSSSG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2508 333 PANTHER DNA-BINDING DOMAIN 76 274 IPR044808 GO:0003700|GO:0009873
Bisa08g2508 333 MobiDBLite consensus disorder prediction 276 333 - -
Bisa08g2508 333 CDD AP2 127 186 IPR001471 GO:0003700|GO:0006355
Bisa08g2508 333 MobiDBLite consensus disorder prediction 276 299 - -
Bisa08g2508 333 MobiDBLite consensus disorder prediction 318 333 - -
Bisa08g2508 333 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Bisa08g2508 333 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Bisa08g2508 333 MobiDBLite consensus disorder prediction 36 61 - -
Bisa08g2508 333 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Bisa08g2508 333 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Bisa08g2508 333 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Bisa08g2508 333 Gene3D AP2/ERF domain 126 186 IPR036955 GO:0003700|GO:0006355
Bisa08g2508 333 MobiDBLite consensus disorder prediction 44 61 - -
Bisa08g2508 333 FunFam Ethylene-responsive transcription factor 2 126 185 - -
Bisa08g2508 333 SUPERFAMILY DNA-binding domain 127 185 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2508 Bisa-ChrBisa08 59087193 59089299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2508 119 189 AP2-EREBP Transcription Factor Family AT5G61890 78.378 1.99e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa08g2508 AP2 3.9e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2508 08 59087193 59089299 Bisa08g2508 08 59087193 59089299 ECH