Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2497 ATGGATTTGGACGATTTCCGAACAATACTGGAGACTGCAGGTGTGGATGTATGGATGTTCATCGACACCGCAATCGACGTGGCTTCCATGGACCACAGCAATGAGTTGAAGCATCGAAGGGATGGAATCGTTCAGCGTCTGTACGCTGCCACTTCAGTTCCTGGACGGTGTCGGAACTGCGAGGCCAATAATTTCAAGCCTAATGGCCGGGAAATAAGGGCTCCAATCAAGAAACAGAGCTCTCCTGAAATGAAAAGAAGTGCATCGCCTACATCGCCGCACTCTATTGGTCAAGACGACGACGATTTTGATCCTTATGGAGGCCTTCTTGATGATGAGCAGAAGAAGATTCAAGAGATCAAAGAGCAACTTGAAGAACCTGATCAGTCTGAAGATTATATGGTGGATTTGCTACAAAATCTCGCAGACATGGATATTACATTCCAAGCGCTAAAGGAAACTGACATCGGGAGGCACGTGAATCGGTTGCGCAAGCATCCGTCCAATGATGTTCGGAGATTAGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGATGAATGGGTGAAGGTAAATCAACCAGGAGATCACGGTTCTCTCATGGCCGATGGAGACTCACCTCAGCAGAAAAATCCCCACAACGGGCATAATCAGATTCCTGATTTTGCATACTCGCCTAATCCACACAATGGGAGTTATGGGTCAGAGCGGAACTATTCAGAAGCTGAACCAAAACCAAAAACAGTTCCTCGAAAAGCTCCACCAAAATCAGCGACCCCAGTTCCTAGTCCTGCTTCTGCTCCTCAAAACACAAAGAAAGAGCAGAGAGACAGCAATCTTGAAGCACAGAGACTTGCTTCGGCAAGAAGACGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCCAAAAGGCAAAGAACGATCCAGGTGATGGACATCCATGACATACCAAAACCAAAGAATGCCTTCTTTGCAAAGAACAAAGGTGGTGGCGGTTCTCAGGGAAGGCAGTGGTAA 1020 0.4676 MDLDDFRTILETAGVDVWMFIDTAIDVASMDHSNELKHRRDGIVQRLYAATSVPGRCRNCEANNFKPNGREIRAPIKKQSSPEMKRSASPTSPHSIGQDDDDFDPYGGLLDDEQKKIQEIKEQLEEPDQSEDYMVDLLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKVNQPGDHGSLMADGDSPQQKNPHNGHNQIPDFAYSPNPHNGSYGSERNYSEAEPKPKTVPRKAPPKSATPVPSPASAPQNTKKEQRDSNLEAQRLASARRRLQENYKEAENAKRQRTIQVMDIHDIPKPKNAFFAKNKGGGGSQGRQW 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2497 339 ProSiteProfiles TFIIS N-terminal domain profile. 112 189 IPR017923 -
Bisa08g2497 339 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 110 198 IPR035441 -
Bisa08g2497 339 MobiDBLite consensus disorder prediction 205 238 - -
Bisa08g2497 339 Pfam TFIIS helical bundle-like domain 137 186 IPR017923 -
Bisa08g2497 339 MobiDBLite consensus disorder prediction 275 312 - -
Bisa08g2497 339 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 115 198 IPR035441 -
Bisa08g2497 339 MobiDBLite consensus disorder prediction 194 312 - -
Bisa08g2497 339 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 339 IPR044790 -
Bisa08g2497 339 SMART TFS2_5 117 188 IPR003617 GO:0005634
Bisa08g2497 339 MobiDBLite consensus disorder prediction 82 96 - -
Bisa08g2497 339 Coils Coil 283 310 - -
Bisa08g2497 339 MobiDBLite consensus disorder prediction 63 109 - -
Bisa08g2497 339 CDD TFIIS_I 114 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2497 Bisa-ChrBisa08 58845469 58847442 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Bisa08g2497 Med26 1.3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2497 08 58845469 58847442 Bisa08g2497 08 58845469 58847442 ECH