Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2487 ATGCTGCAAGTTTCGAGTTTGCCGGAGAACTCCATCGATAATCGGCGGCGAGCGGAGGAGGGCGGGAGTGGGCCTGCGTCGGATGGGTTCAAGGACGAACCAGGAGTTGTCTCCGCCGGCGAGGAGGTTGGTGACCGGAATGTCAACGGTAACCGGTGGCCGCCGGAAGAGACTACGGCTTTGCTCAAGATAAGGTCTGACATGGACGTTGCTTTCAGGGATGCAACAACCCCCAAAGTTCGTCTCTGGGAACAAGTTTCAAGGAGATTAGAGGAGCTAGGATACAATAGAAGTGCGAAGAAATGCAAGGAGAAGTTTGAAAACATTTACAAGTACCACAGAAGGACGAAGGAAGGTCGTCATGGGCGAACCAATGGCAAGACTTATCGATTCTTTGAGCAATTAGAGTCTCTCCTAATTCCACCTTCCCCAGAAAAGAATCAGGGACAAGTGGAGAGCACTGCAAAAGCTACGACGACCCCAATGGATGATGTACCAAATGTTATTGAAGATGCAATGCCATGTTCGATTCGATTCCCCAGTGACCCCTCTAGCTCAACCACTTCCTCTTCGAGCAAAGAACCAGGAAGGGAAAAGGAAAACATTCGGAAGAAGAAGAGGAAAATGACTGGGTTTTTTGAGAGATTGATGAAGGAAGTAGTGGAGAAGCAAGAGAGTCTACAGAAGAACTTCATGGAGATGTTGGAAAGATGTGAACAAGAAAGAATAGCGAGAGAGGAAGCATGGAAGATGCAGGAATTAGCTAGGATCAAGAGAGAGCGTGAGCTTTTGGCTCAAGAAAGGTCAGTTGCAGTAGCAAAAGATGCTGCAGTGCTTGCCTTTCTCAAAAAGTTCACAGAACAAGCAGGTCCAGTGCAATTGCAAATGCCTGAGCCAGTTCTGATTGAGAACCCAATCCCAAATGAGAAAGACAAGGACGAGCAAGAAAATGAAAATGCAGGCAGTGTTATGACAGATAAGCAAGAATGTAGTAGAAAAGGTGGGAATTTCACACAGACGAGTACTTCATCTTCATCTTCCTCACGATGGCCCAAAGATGAAGTGGAAGCTTTGATTAGACTAAGGACAAATTTTGATGTGGAGTACGAAGGAAACGGACCTAAAGGGCCTTTATGGGAGGAAATATCCTGTGCGATGAAGAAGCTTGGGTATGATCGGAGTGCCAAGAGATGCAAAGAGAAATGGGAGAATATGAATAAATACTTCAAAAGGATGAAGGAGAAGAACAAGAAAAAGCCTGAGGATTCAAAGACGTGTCCTTATTTTCACCAGCTTGACGCTCTGTACAGTAGTGAAAAGCCCAAGAGGGTGGAGGAATCAGTGGGTTCAGGTAAGAATCAAGTGAAACCCGAGGAGTTGCTAATGCATATGATGGGAGGTCAGTCTCAGTCATCGTCTGAAGATGCTGAGAGAGAGAAGAAGGATCAGAATAGTAATGGAGGAGATAGTGGTGACCATTAA 1482 0.4602 MLQVSSLPENSIDNRRRAEEGGSGPASDGFKDEPGVVSAGEEVGDRNVNGNRWPPEETTALLKIRSDMDVAFRDATTPKVRLWEQVSRRLEELGYNRSAKKCKEKFENIYKYHRRTKEGRHGRTNGKTYRFFEQLESLLIPPSPEKNQGQVESTAKATTTPMDDVPNVIEDAMPCSIRFPSDPSSSTTSSSSKEPGREKENIRKKKRKMTGFFERLMKEVVEKQESLQKNFMEMLERCEQERIAREEAWKMQELARIKRERELLAQERSVAVAKDAAVLAFLKKFTEQAGPVQLQMPEPVLIENPIPNEKDKDEQENENAGSVMTDKQECSRKGGNFTQTSTSSSSSSRWPKDEVEALIRLRTNFDVEYEGNGPKGPLWEEISCAMKKLGYDRSAKRCKEKWENMNKYFKRMKEKNKKKPEDSKTCPYFHQLDALYSSEKPKRVEESVGSGKNQVKPEELLMHMMGGQSQSSSEDAEREKKDQNSNGGDSGDH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2487 493 MobiDBLite consensus disorder prediction 321 351 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 473 493 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 305 320 - -
Bisa08g2487 493 FunFam Trihelix transcription factor GT-2 350 411 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 1 54 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 437 493 - -
Bisa08g2487 493 FunFam Trihelix transcription factor GT-2 53 115 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 193 207 - -
Bisa08g2487 493 SMART sant 49 112 IPR001005 -
Bisa08g2487 493 SMART sant 346 408 IPR001005 -
Bisa08g2487 493 CDD GT1 51 117 - -
Bisa08g2487 493 PANTHER FI21293P1 31 484 - -
Bisa08g2487 493 SUPERFAMILY Homeodomain-like 348 408 IPR009057 -
Bisa08g2487 493 ProSiteProfiles Myb-like domain profile. 45 110 IPR001005 -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 141 207 - -
Bisa08g2487 493 Pfam Myb/SANT-like DNA-binding domain 51 138 IPR044822 -
Bisa08g2487 493 Pfam Myb/SANT-like DNA-binding domain 348 435 IPR044822 -
Bisa08g2487 493 Gene3D - 350 411 - -
Bisa08g2487 493 Gene3D - 53 115 - -
Bisa08g2487 493 CDD GT1 349 409 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 303 352 - -
Bisa08g2487 493 MobiDBLite consensus disorder prediction 141 161 - -
Bisa08g2487 493 ProSiteProfiles Myb-like domain profile. 342 406 IPR001005 -
Bisa08g2487 493 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2487 Bisa-ChrBisa08 58680041 58681826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2487 39 436 Trihelix Transcription Factor Family AT1G76880 47.439 5.16e-128 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa08g2487 Myb_DNA-bind_4 1.9e-21 CL0123