Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2473 ATGAGTTTGGAGGGTGCAGACAACCCAGTGGAATGTGTAGGGCATGCAGAGTCTCCCGATCCCGATATTGTTGAAATTGATCCAACTTGTCGCTATATTAGGTACAAAGAGGTCATCGGGAAAGGTGCTTTCAAAACTTGTTATAAGGCATTTGATGAGGTCAATGGAATTGAAGTAGCCTGGAACCAGGTTCAGATTGATGATGTGCTACAGTCACCGGGTGACTTAGAAAGGCTCTACTCAGAAGTGCATCTCTTGAAATCATTGAAGAACGATAATATAGTAAAATTCTACAATTCATGGATTGATGATAAGCACAAGACTGTTAACATAATTACTGAGTTGTTCACCTCGGGTAGCCTCAGACAGTATCGTAAGAAACACAAGAAGGTTGACATAAAGGCTGTAAAAGGATGGGCGAGACAGATTTTAATGGGTTTAAACTACCTCCATAGTCACAACCCACCCATAATACATAGGGATCTCAAGTGTGATAATATCTTTATCAATGGCAACCAAGGCGAAGTTAAAATTGGAGATCTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTAATTGGAACCCCTGAGTTTATGGCACCTGAGCTATATGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGAATGTGCATGCTTGAGATGGTGACTTCTGAGTATCCTTACTGTGAATGCAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCAGGTATAAAACCTGCTTCTCTTTCTAAAGTCAAAGATTCAAAAGTGAGGTTATTTATTGAGAAATGCCTAGTCCCAGCACCTCAGAGATTGTCAGCAAAGGAGCTTCTGATGGACCCTTTTCTCGAAGTGAATGGTTCGGTAAAAAATTGTCCTCTCTCACTACCAGATATTGTTATTCCCAAACTTGGACCCTTTGGAGATCGTATACTGATGTCAGAAGGTCCTGCTACTCAACGTAATGGATCAAGTTCTTTGGTTCTCGATGCCTCCTGTGACCTACCTGTTATCACTGTATTTGATTGTTCTAATGATGATGCCTTGCGTTCTCCTTGTGTCGAGATACGAAGGTTGAAGGGAGGTGATATTTTCTCTCTTAAAGGCCAAGAAAATGATGAGAACTCGATATCAATAGTTCTCCGGATAGCTGATGATGGCGGGCGGGCAAGAAATATTCACTTTCTATTCTTCCTTGACAGTGATACTGCCATCTCAGTTTCCAGAGAAATGGTTGAGCAACTTGAACTTGCGGATCAAAATGTGAAATTCATAGCTGAGTTAATAGATCTGTTATTGATGAATTTGGTTCCAAGATGGAAACCTTGTGTAGACATTTCTCATTTGGCTTCAGCAAATTGTAAAAAGCCTATCGCTCAACAGGAAGACTCTGGGTTGGCAAAACAGAAACAAATATTAGAAGGTTCTAGCCAAAATGTGGCCGAAGTTGTAGGTCTCTCAAACTTGCACGGAGGGTCAGCTACAAAACAAGACCATGATCACTTCAACTTTGATGAGGCCTTATTTCATGCCAGCATTGATACTAGAAGCGCAGCTAAGACAGATGATTTGTGTTCTGAGATCTCATATGCTTCTGCAACATCTGACAATAATGATAAGTCATCTCTAGGTTCATATATGTCTGTTGATTCGACATTTGCTGACTTCTACTTATCCAGAGAGAGAGGACAGAGTGAAGCCTCATTTGCATCTGTAAGAGGGGAATCGCCTGATCATTTCGGGAGCAAGACTTCATACTTGGGAATCCATGATATGTTGAACGTCTCTACCAATCCTAGTAGCGTGTCCTCCTTGTCTGATCCGGAGGATGAGTTAAGAATAGAGTTAAATATGATTGAACAGAAGTACCAGGAGGCAATCAAAGAAATATCCAAAAGAAGGAACCAGGCCATCATGGAGACCAGAAGGAGGCTGTCCCAGAAGAAGATGCAGTCATAG 1980 0.4126 MSLEGADNPVECVGHAESPDPDIVEIDPTCRYIRYKEVIGKGAFKTCYKAFDEVNGIEVAWNQVQIDDVLQSPGDLERLYSEVHLLKSLKNDNIVKFYNSWIDDKHKTVNIITELFTSGSLRQYRKKHKKVDIKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTSEYPYCECRNSAQIYKKVSSGIKPASLSKVKDSKVRLFIEKCLVPAPQRLSAKELLMDPFLEVNGSVKNCPLSLPDIVIPKLGPFGDRILMSEGPATQRNGSSSLVLDASCDLPVITVFDCSNDDALRSPCVEIRRLKGGDIFSLKGQENDENSISIVLRIADDGGRARNIHFLFFLDSDTAISVSREMVEQLELADQNVKFIAELIDLLLMNLVPRWKPCVDISHLASANCKKPIAQQEDSGLAKQKQILEGSSQNVAEVVGLSNLHGGSATKQDHDHFNFDEALFHASIDTRSAAKTDDLCSEISYASATSDNNDKSSLGSYMSVDSTFADFYLSRERGQSEASFASVRGESPDHFGSKTSYLGIHDMLNVSTNPSSVSSLSDPEDELRIELNMIEQKYQEAIKEISKRRNQAIMETRRRLSQKKMQS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2473 659 Coils Coil 616 643 - -
Bisa08g2473 659 Gene3D Phosphorylase Kinase; domain 1 17 114 - -
Bisa08g2473 659 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2473 659 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2473 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Bisa08g2473 659 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Bisa08g2473 659 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 655 - -
Bisa08g2473 659 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Bisa08g2473 659 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Bisa08g2473 659 CDD STKc_WNK 31 290 - -
Bisa08g2473 659 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2473 659 SUPERFAMILY Protein kinase-like (PK-like) 35 291 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2473 Bisa-ChrBisa08 58497097 58500713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2473 133 456 MAP Kinase Kinase Kinase AT1G49160 71.605 6.66e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bisa08g2473 Pkinase 1.2e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2473 08 58497097 58500713 Bisa08g2473 08 58497097 58500713 ECH