Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2460 ATGTCCTCTCTTCCCAGGAAACCAACTTCCTCTTCTCAACACTCCACTTTTTCTTCCCGCTTCTCTCTTTACTCTCCTTCCTTCCTCCTCTTCTCCATGGCTTCCCTCCTCTCTCTCTCCATCCTCTCCCTCCTCCTCTTCCTCTCTCTCTCCTCCGCCGCCCGCCACCACCGCCAGCCCCCTTCTGCCGCCTCCTCCTCCGCCCCATCCACCTCTATCACAATCGCCTGTAAAGCCACGCGCTTCCCTCAACAATGCGAATCTTCTCTCTCCCAATCGAGCCACGTGCCCCCTAACCCCACCCCCGTTCAGATAACCCAATCCGCCATGGCCGTCTCCTCCGACAACCTCAAGACCGCGCAATCCAAGGCCAAGGCCATCCTGGACGCCTCCGCATCCAGCCTCAACCGCACCACCGCCTCCAATATCTGCCTCGAGGTGCTCCGGAACGCCGATTACCGCATCAATCTGGCCAATGACGCGCTGCCGCGTGGCAGGACCAAGGACGCGCGGGCCTGGATGAGCGCCGCCGTTCTCTACCAGTACGATTGCTGGTCTGCTCTGAAATACGCCAACGACACTCACTTGGTGGACGAGACCATGGCCTTCCTGGACTCCCTCATTAAGCTTTCGAGCAACGCGCTGAGCATGGTGGCGTCGTACGATTTGTTCGGGAACGACACGGCGTCGTGGAGGCCCCCCTTGACGGAGCGCGATGGCTTCTGGGGGGAATCCGGATCGGGTGCTGGGTCCGGATTGGCGTTCCGGGGCGGGTTCCCGACGAAAGTGAAGCCGGACGCTACGGTGTGTAAGGGCGGAGGGGATGGGTGCTACAAGACGGTGCAGGAGGCTGTGAATGCTGTTCCAGATAACGCGGGGACGAACAGGTTTGTAATATATATAAAGGAAGGGGTTTATGAGGAGACGGTGAGGGTTCCATTGGAGAAGAAGAATGTGGTGTTTTATGGCGACGGAATGGGTAAGACCGTCATCACAGGGTCCGCTTTTGCTGATAAACCCGGAGTGACCACTTACACCTCTGCAACAGTTGCGGTTCTGGGGGATGGATTCATGGCGAAGGCTCTGACAATCCAGAACACAGCAGGTCCTGTGGCCCATCAAGCAGTGGCCTTAAGATCAGATAGTGATCTCTCTGTGTATGAGGAAGTTGAATTCATAGGCAATCAAGACACACTTTATGCTCACTCCCTCCGGCAATTCTACAAATCATGCCGCATTCTGGGAAACGTGGATTTCATCTTTGGAAACTCAGCTTCCATCTTCCAAGACTGCCAAATCCTAGTACGGCCCCGGCAAGTGAAGCCGGAGAGCGGCGAGAACAATGCGGTCACAGCACATGGCAGAACCGACCCTGCCCAGTCAACAGGCTTTGTTTTCCAGAACTGCTTGATAAACGGCACTCAGGACTACATGGTTTTGTACCACAGCAAGCCTCAGAAACACAAGAACTACCTGGGGAGGCCCTGGAAGGAGTATTCGAGGACAGTTTTCATTCGTTGTTTCTTGGAAGCTCTCATAACTCCCTCTGGTTGGCTTCCCTGGGGTGGTGATTTTGCTTTAAAGACGCTTTACTATGGAGAGTTTCAGAACTCCGGACCCGGTTCTAGCTTGACAGAGAGAGTACGATGGAGCGGCAGCATCCCACCTGAGCATTTGATGACATATTCAGTGCAGAATTTCATTCAAGGAGATGAGTGGATTCCATCAACTCTTATTAGCTCGTTAGATTTGTCATAG 1758 0.5455 MSSLPRKPTSSSQHSTFSSRFSLYSPSFLLFSMASLLSLSILSLLLFLSLSSAARHHRQPPSAASSSAPSTSITIACKATRFPQQCESSLSQSSHVPPNPTPVQITQSAMAVSSDNLKTAQSKAKAILDASASSLNRTTASNICLEVLRNADYRINLANDALPRGRTKDARAWMSAAVLYQYDCWSALKYANDTHLVDETMAFLDSLIKLSSNALSMVASYDLFGNDTASWRPPLTERDGFWGESGSGAGSGLAFRGGFPTKVKPDATVCKGGGDGCYKTVQEAVNAVPDNAGTNRFVIYIKEGVYEETVRVPLEKKNVVFYGDGMGKTVITGSAFADKPGVTTYTSATVAVLGDGFMAKALTIQNTAGPVAHQAVALRSDSDLSVYEEVEFIGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQSTGFVFQNCLINGTQDYMVLYHSKPQKHKNYLGRPWKEYSRTVFIRCFLEALITPSGWLPWGGDFALKTLYYGEFQNSGPGSSLTERVRWSGSIPPEHLMTYSVQNFIQGDEWIPSTLISSLDLS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2460 585 Pfam Plant invertase/pectin methylesterase inhibitor 73 217 IPR006501 GO:0004857
Bisa08g2460 585 Pfam Pectinesterase 267 571 IPR000070 GO:0030599|GO:0042545
Bisa08g2460 585 SUPERFAMILY Pectin lyase-like 263 579 IPR011050 -
Bisa08g2460 585 Gene3D - 260 582 IPR012334 -
Bisa08g2460 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 221 IPR035513 -
Bisa08g2460 585 FunFam Pectinesterase 260 583 - -
Bisa08g2460 585 CDD PMEI-like_3 76 222 - -
Bisa08g2460 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 218 IPR035513 -
Bisa08g2460 585 PANTHER PECTINESTERASE 44 575 - -
Bisa08g2460 585 NCBIfam pectinesterase inhibitor domain 39 218 IPR006501 GO:0004857
Bisa08g2460 585 SMART PMEI_2 68 217 IPR006501 GO:0004857
Bisa08g2460 585 FunFam Probable pectinesterase/pectinesterase inhibitor 51 71 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2460 Bisa-ChrBisa08 58336641 58338964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2460 66 573 Carbohydrate Esterase AT5G09760 65.625 0.0 708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2460 08 58336641 58338964 Bisa08g2460 08 58336641 58338964 ECH