Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2458 ATGGACACCAACCACACTCCTCATCATCCCACTCCCATTACATTCCCCAATCTTAACCCCACCACCACTTGGAATAATAACAATCTTGAAACCATGGGATTGGGATTAATGGCAACTACTGCTACTACCACCACCATTACTAATTCTAATGCCAATATTCCCATGGCTTCTCCTTGGCTATTCACCTACCCTCCTCTTCAAATCCCACCCTCAATGCCCTCCTCTTCTTCCTCCTCTTCTAGCTTTCTCATGATTGACATGTTGGGCATCCACGAAGGAGAAGGAGAAGGTGAAGGTGAGGAAGAAGTAGGAGAAGAGGAAGAGGAGTTGGGGGCCATGAAGGAGATGATGTTCAAGATCGCCGCTATGCAGCCTGTGGACATCGACCCCGCCACCATCCGCAAGCCCAAGCGTCGCAACGTCCGCATCAGCGACGACCCCCAGAGCGTCGCCGCCCGCCACCGCCGCGAGCGCATCAGCGAGAAGATCCGCATCCTCCAGCGCCTCGTCCCCGGAGGCACCAAGCTCGACACCGCCTCCATGCTCGACGAAGCTATCCGCTACGTCAAGTTCTTGAAGCGCCAAATCAGACTCCTCCAATCCACCGCACCCCCACACTCCATTATTCCTCCACCAAATCCTCCTCCTCCTCTTGTTGATCATTGGCCTTTTGCACCACATATATCCTCCACGGCCACCGCCGCCGGCATGGAGTTCAACGCCGGCGATAGCACCTCGGGGTTTAACCATGAGGGTGATGATGTAGAAGAAAGCCCTGAAGGGGTCAGAGAGAAAGTGAGGAAACAAGTTCTAGCTAGATGCCAGAGTTTGCTAACTTGCGTCTGA 846 0.5378 MDTNHTPHHPTPITFPNLNPTTTWNNNNLETMGLGLMATTATTTTITNSNANIPMASPWLFTYPPLQIPPSMPSSSSSSSSFLMIDMLGIHEGEGEGEGEEEVGEEEEELGAMKEMMFKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKLDTASMLDEAIRYVKFLKRQIRLLQSTAPPHSIIPPPNPPPPLVDHWPFAPHISSTATAAGMEFNAGDSTSGFNHEGDDVEESPEGVREKVRKQVLARCQSLLTCV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2458 281 CDD bHLH_AtIND_like 144 201 - -
Bisa08g2458 281 Gene3D - 146 204 IPR036638 GO:0046983
Bisa08g2458 281 Coils Coil 281 281 - -
Bisa08g2458 281 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 202 IPR036638 GO:0046983
Bisa08g2458 281 FunFam BHLH transcription factor 146 207 - -
Bisa08g2458 281 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Bisa08g2458 281 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 48 221 IPR045843 GO:0003700|GO:0006355
Bisa08g2458 281 Pfam Helix-loop-helix DNA-binding domain 153 192 IPR011598 GO:0046983
Bisa08g2458 281 MobiDBLite consensus disorder prediction 249 263 - -
Bisa08g2458 281 SMART finulus 149 198 IPR011598 GO:0046983
Bisa08g2458 281 MobiDBLite consensus disorder prediction 243 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2458 Bisa-ChrBisa08 58302847 58304341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2458 112 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 70.270 1.67e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa08g2458 HLH 3.9e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2458 08 58302847 58304341 Bisa08g2458 08 58302847 58304341 ECH