Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2450 ATGGCGAAAACAAAATTGATTCCCGGATTTCGGTTCCATCCGACTGATGTTGAGTTGCTTAAGTACTTTTTGAAGAGGAAGGTTATGGGGAAAAAATTCTTTGTTGATGTGATTGCCGAAGCCGACATATACAAGTACGCACCGTGGGATCTCCCTGATAAATCTTGCCTGAGAACTGGCGATTTGGAATGGTACTTCTTTTGCCCTAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGCGCTACAGAATTTGGGTTCTGGAAAACTACAGGGAAGGACAGAGATGTTCATTACAATAGTCAAATTGTGGGGAAGATAAAAACACTAGTATTTCACAGAGGTAAGGCATCTCACGGAGACAGAACTGATTGGGTCATGCATGAATATAGACTCCAAGATAAGGAACTAAGTGAAGGCATTCCGCAGGATTCCTATGTGCTTTGTAAGGTTTTCCAGAAGGATGGTCCTGGGCCTAGGAATGGTGCACAATATGGAAGACCATTCAATGAAGAAGATTGGGATGATGATGAGGAAATTGATGGTGTAGGTTCCGTCCCTTTAGCTGCTATGTCTGCACCAGTTCCCATTCTTCCTGTTACACATAATAGTTCTGTTGCAACTGACATGCACCCCCCTGTGAGTGGATATACTGGGTCATCATCTATGTCATGTCTTTCAGGAGTTATGCCTTCTCCTTGTCCGATGCTTCCCTCAGTTCCAAGTGATCAAGTTATATTGAATGACAGTCCTCAAGCTCCAGTTGATGATGATATTTCATTGATGTTGGATTGGTTCACAGAGGATAACACACTGGCTTTGAATGAGAACGAAACTGAGAAGATTGATAATTCTGTTCAGGGAAAGGACGCTGAAGTGGCACCTTGTTTGGATGTGAATGATATTTTCAAGGACTTGGGAGACCTTGAAAACTTGCCTGGATGGGGAGATGGACAACACTGTGTCAAGGAAGCTGAATGCAATACAAATCAAATGTTTCCTTTGGAGTTTGGTGACCGAGACTTCTTAGAGCTGCATGACCTTGACTCTCCATTGTTCCAGCACACTGAACAACCTGAAAATTGGGGTCTATCTGATCCACAAAAGGAGGGTTTAGTAGTACCTGCAAATAGTGATGAAAATGCGGACTAG 1155 0.4312 MAKTKLIPGFRFHPTDVELLKYFLKRKVMGKKFFVDVIAEADIYKYAPWDLPDKSCLRTGDLEWYFFCPREKKYASGARMNRATEFGFWKTTGKDRDVHYNSQIVGKIKTLVFHRGKASHGDRTDWVMHEYRLQDKELSEGIPQDSYVLCKVFQKDGPGPRNGAQYGRPFNEEDWDDDEEIDGVGSVPLAAMSAPVPILPVTHNSSVATDMHPPVSGYTGSSSMSCLSGVMPSPCPMLPSVPSDQVILNDSPQAPVDDDISLMLDWFTEDNTLALNENETEKIDNSVQGKDAEVAPCLDVNDIFKDLGDLENLPGWGDGQHCVKEAECNTNQMFPLEFGDRDFLELHDLDSPLFQHTEQPENWGLSDPQKEGLVVPANSDENAD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2450 384 FunFam Nac domain-containing protein 86 15 158 - -
Bisa08g2450 384 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Bisa08g2450 384 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Bisa08g2450 384 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Bisa08g2450 384 MobiDBLite consensus disorder prediction 357 384 - -
Bisa08g2450 384 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 203 - -
Bisa08g2450 384 Gene3D NAC domain 15 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2450 Bisa-ChrBisa08 58123813 58126565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2450 1 271 NAC Transcription Factor Family AT5G64060 54.448 1.47e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa08g2450 NAM 6.2e-34 No_clan