Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2444 ATGCCCGCTTGGTGGCCGAGAAAATCCAGCAAGAACAAGGAGCGCCAACAGCAGGAATCACATGCTGCTGCCGGCCACCAATTCAATTTCAACAAATCCCCCATTAGGAATGGTGCGAAGAAGGAAAAGGACAAGCCCAAGAGCTTCGATGAGGTTTCCGCCGTGATCCTCCCTCGCAATTCCCCCCGGGGCAGTAGGGATTTCACGTCCGCGCCTGCTGGTGTTGGCGGCTCGTCTTCGGGAATTTCTTGTTGCGATTCCGACGGAGGAGAGAAGAGAGGGCTTCCCTTGCCTCGACCATCGGTTTCGTCCACCTACAGCTTTGAGAAGGATCAGTCGGGTGGATTGGGATCTGCCTCGATCTCTGGTTCTAGCGTCAGCTCCACTGGCTCCTATGATGATCATCCAATCTCTCAATCTAATTGTAGCAGAGGGCAAGGCGATATGAAGTTCACTATGAGGTCAAAAAGCCCGGGTCCTGGGTCAAGAGGGCCTACCAGCCCTACATCACCTCTTCATCCAAGGTTGCATGTTTTGAGTCTTGATTCACCTACTGGTAAGCAAGATGATGGAATGAATCAATGCCATCCATTGCCTCTTCCTCCAGGTTCTCCTACTAGTCCTTCTGCTCTTTCCAATGCACGAGCAACTGGAGTGCAAGAATACAGTGCCAGTAATCTATCCAAGTGGAAGAAAGGAAAGCTTCTAGGACGAGGAACATTTGGGCATGTTTACCTGGGATTTAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTTAGGGTCGTCTCTGATGATCATACATCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAAATTTGCTTAGTCAACTTTCACATCCGAACATTGTTCAATACTACGGTAGTGAACTGGGAGATGAAGCACTCTCAGTTTATTTGGAATATGTCTCTGGTGGTTCTATCCATAAATTACTTCAGGAATATGGTGCATTCAAGGAACCTGTTATTCAAAATTATACCAGACAGATAGTCTCTGGACTTGCCTATCTGCATGGCAGAAATACAGTCCACAGGGATATTAAAGGGGCCAACATATTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGATTTTGGAATGGCTAAACATATAAATTCTTCTGCTTCAATGCTTTCTTTCAAGGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAACACAAATGGCTATAGTCTTGCGGTGGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCATGGAGTCAGTATGAAGGGGTAGCTGCAATATTCAAAATTGGAAACAGCAAAGATAGGCCTTATATTCCAGAGCATCTTTCAAATGATGCAAAGGGTTTTATAAAGCTATGCTTAAATAGAGATCCAGCAGCTCGCCCAACAGCTCAGCAATTACTTGAGCACCCATTTATTCGAGATCAATCTGCAACAAGAGCTGCAAATGTCAACATAACCAGGGATGCTTTCCCCTACATGTTTGACGGAAGCCGGACTCCGCCAGTTTTAGAGCTTCATTCTAATAGAACAAGTATGACTTCACTTGATGGAGATTATGCAACAAAGCCGGCTATTGTTTCTTCACGAGCATTAAGGAGTCCCAGAGATAACTCGAGAACGATTACATCATTACCCGTATCTCCCTGTTCAAGTCCATTACGACAGTCCGGCCCAGCACACACGAGCTGTTTCCTTTCTCCTCCTCATCCGACTTACACCATGATGGGGCAAAATCACTACACTCGGAATGAATTCTCATCATATCCATTGAGATCGAGTGCCACATTCACCCTTGATCCTTGGCATGAAACATCTCTATACAAAGCCCATACACCTGGTGGGTCCCCAAGATCGAGACTCATTTGA 1908 0.456 MPAWWPRKSSKNKERQQQESHAAAGHQFNFNKSPIRNGAKKEKDKPKSFDEVSAVILPRNSPRGSRDFTSAPAGVGGSSSGISCCDSDGGEKRGLPLPRPSVSSTYSFEKDQSGGLGSASISGSSVSSTGSYDDHPISQSNCSRGQGDMKFTMRSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTGKQDDGMNQCHPLPLPPGSPTSPSALSNARATGVQEYSASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDHTSKECLKQLNQEINLLSQLSHPNIVQYYGSELGDEALSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDRPYIPEHLSNDAKGFIKLCLNRDPAARPTAQQLLEHPFIRDQSATRAANVNITRDAFPYMFDGSRTPPVLELHSNRTSMTSLDGDYATKPAIVSSRALRSPRDNSRTITSLPVSPCSSPLRQSGPAHTSCFLSPPHPTYTMMGQNHYTRNEFSSYPLRSSATFTLDPWHETSLYKAHTPGGSPRSRLI 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2444 635 MobiDBLite consensus disorder prediction 546 567 - -
Bisa08g2444 635 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 26 494 - -
Bisa08g2444 635 FunFam Mitogen-activated protein kinase kinase kinase 228 510 - -
Bisa08g2444 635 Gene3D Transferase(Phosphotransferase) domain 1 227 506 - -
Bisa08g2444 635 SUPERFAMILY Protein kinase-like (PK-like) 227 558 IPR011009 -
Bisa08g2444 635 MobiDBLite consensus disorder prediction 100 150 - -
Bisa08g2444 635 SMART serkin_6 230 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2444 635 MobiDBLite consensus disorder prediction 1 212 - -
Bisa08g2444 635 MobiDBLite consensus disorder prediction 63 85 - -
Bisa08g2444 635 CDD STKc_MEKK1_plant 229 486 - -
Bisa08g2444 635 ProSiteProfiles Protein kinase domain profile. 230 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2444 635 Pfam Protein kinase domain 231 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2444 635 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Bisa08g2444 635 MobiDBLite consensus disorder prediction 36 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2444 Bisa-ChrBisa08 58057779 58064788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2444 1 549 MAP Kinase Kinase Kinase AT1G53570 59.715 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa08g2444 Pkinase 1.6e-74 CL0016