Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2442 ATGCTGAATGCTATGAATCTCCCTTCTCTCACTTGCTTCTCTGAGCGTTTTGTTGCTCCTCGATACTCTACAGCTCCTGCCAGGAATTATAATACGGATAATATTGCTATTGAGGGTCGTAACCTGAATTTCTCATTCACCTCAAGGCAGGTGAAAGCTGTACCGATTCTTCGGGATTGTTCGATTTGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGTGGAAAATCTACCCTCTTGAAGATCCTGGCTGGTCTTTTAAATCCGTCTTCTGGAACTGTGTACGTGAAAGGGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTAATGCCTACGGTAGAAGCTGATGTTGCATTTGGTCTTGGTAAGTTCAACCTTACCTACGATGAAGTCAGATCAAGTGTGTCCAGAGCATTGCATGCTGTGGGTATGTCTGATTACATGCAGAGATCTGTCCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAAAGTTTTGTTGTTGGATGAGCTCACAACGTTCTTAGATGAAAGTGACCAGGTGGGGGTTATCAAAGCGGTTAGGAACTCTTTGGATACCTCTTCTGAAGTTACAGCATTGTGGGTGACTCATCGTTTGGAAGAACTAGAGTATGCTGATGGCGCAATTTACATGGAGGATGGGAAAGTTATCATGCATGGAGATGCTCCAAGCATAAGAAGTTTCATTGAAGGCAGGCAATCCGACTACATCAAACAGATTAATTATTGA 801 0.4395 MLNAMNLPSLTCFSERFVAPRYSTAPARNYNTDNIAIEGRNLNFSFTSRQVKAVPILRDCSICIPSGQFWMLLGPNGCGKSTLLKILAGLLNPSSGTVYVKGPKSFVFQNPDHQVVMPTVEADVAFGLGKFNLTYDEVRSSVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDESDQVGVIKAVRNSLDTSSEVTALWVTHRLEELEYADGAIYMEDGKVIMHGDAPSIRSFIEGRQSDYIKQINY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2442 266 FunFam ABC transporter I family member 10 33 263 - -
Bisa08g2442 266 Pfam ABC transporter 57 189 IPR003439 GO:0005524
Bisa08g2442 266 SMART AAA_5 66 239 IPR003593 GO:0016887
Bisa08g2442 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 262 IPR003439 GO:0005524
Bisa08g2442 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 37 250 - -
Bisa08g2442 266 CDD ABC_cobalt_CbiO_domain1 38 239 IPR015856 GO:0005524|GO:0016020|GO:0055085
Bisa08g2442 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 251 IPR027417 -
Bisa08g2442 266 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524|GO:0016887
Bisa08g2442 266 Gene3D - 32 263 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2442 Bisa-ChrBisa08 58042563 58047700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2442 37 265 Calmodulin-binding Proteins AT2G36910 28.745 2.30e-16 77.0