Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2436 ATGAACGAACCTCAAATCACTACCCCTCCCATGTTCAGATGCCCCATCAGTTTAGATTTGTTCGAAGACCCTGTGACTTTATGTACAGGCCATACCTATGACAGATCAAGCATTGAGAAATGGCTGGCTTTAGGGAATCTCACATGTCCTGTCACAATGCAGAAGCTTCATGATTTGTCCATTGTTCCTAATCTCACTCTTCGCCACTTGATCCATCAGTGGCTTCAGTATGGAAATCCTCACTCTGATTCATCCATGAAGTCTCTGGCTTCTCTGAAACTCACCCTTCAGTCTCATGAATCCACCTTGCAGAACAAGGTTCAAGCACTTGAGAAAATCATGGTCTTGTCTGATGAATCAATCTTCTTCCAGAAATCTTGTTTCCTCCAACTGGGTTTCTTATCACTACTTTTGGAACTATTTATTGAGGAAGGAGACGCACAGAACAACATTGATCAGATTCACATGGGGTTTATAGAGCTTACACTTTCTTGTGTTCTGAAATTGCTTCCCCTTGGGTTTTTAGAGCCTTTGAAAGTTCTTAAAGAAGAATCTATATTAGAAAAGATCCTGTTTTTATTTGAAAATGGAACTATCAGTGTAAAGACTAATCTGTGTCATCTCATAGATTCAGCAGCATCATCATCAGAAGAGGTATGTCACATTCTTGGAAGCTCAAAGAAGTTAATACAGGAAATCCTTCTTCTTCTTAATCCCCAAAACTGCAAAGCTTCTGAATCTTATTCCATGGCTGCAATCAAAGCCATATCAGCACTATGTAATTGCTCTGAGTCCAACATGCAGAACTTGGTAGAAGCAGGAGCAATATATGACATCATAATCTGCATTTCAGGCTCTGAAAGAAAAGAAAAGAACATGGCTCCATTGGGAATGTCAATAATAGAGAAACTTCTGATGCTACAAAGTGGTAAAGAAGCTTTAGTGAGAAACCCAGAAATTATTAAAGCTTTGGTGAAGATGGTGTTTAGTTTCAGAGTGTGTGATGAAGAGTGTAGTGAAAGTGCAATAGGGTTGCTTCTGAGAGTATGCGGTGAGGATGAAGGAGGGAAAGAGGAAGCCATTAATGGAGGACTTGTGACTAAGCTTCTGTTGATTCTGCAAAGCCAATGTAGCAACAGAATAAAAACAAAGGCAAGGAGGCTGCTCAAGATGGTGACATCAAAGTCCAAGTGA 1194 0.4012 MNEPQITTPPMFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLALGNLTCPVTMQKLHDLSIVPNLTLRHLIHQWLQYGNPHSDSSMKSLASLKLTLQSHESTLQNKVQALEKIMVLSDESIFFQKSCFLQLGFLSLLLELFIEEGDAQNNIDQIHMGFIELTLSCVLKLLPLGFLEPLKVLKEESILEKILFLFENGTISVKTNLCHLIDSAASSSEEVCHILGSSKKLIQEILLLLNPQNCKASESYSMAAIKAISALCNCSESNMQNLVEAGAIYDIIICISGSERKEKNMAPLGMSIIEKLLMLQSGKEALVRNPEIIKALVKMVFSFRVCDEECSESAIGLLLRVCGEDEGGKEEAINGGLVTKLLLILQSQCSNRIKTKARRLLKMVTSKSK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2436 397 PANTHER WDSAM1 PROTEIN 5 394 IPR045185 GO:0061630
Bisa08g2436 397 SMART Ubox_2 11 74 IPR003613 GO:0004842|GO:0016567
Bisa08g2436 397 Pfam U-box domain 9 76 IPR003613 GO:0004842|GO:0016567
Bisa08g2436 397 SUPERFAMILY ARM repeat 98 392 IPR016024 -
Bisa08g2436 397 Gene3D - 179 397 IPR011989 -
Bisa08g2436 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 79 IPR013083 -
Bisa08g2436 397 SUPERFAMILY RING/U-box 3 76 - -
Bisa08g2436 397 CDD RING-Ubox_PUB 9 56 IPR045210 -
Bisa08g2436 397 ProSiteProfiles U-box domain profile. 7 81 IPR003613 GO:0004842|GO:0016567
Bisa08g2436 397 FunFam RING-type E3 ubiquitin transferase 8 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2436 Bisa-ChrBisa08 57983995 57985188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2436 6 380 U-box Gene Family AT3G19380 28.680 1.83e-36 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2436 08 57983995 57985188 Bisa08g2436 08 57983995 57985188 ECH