LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa08g2435	ATGACATTACATATTTCAATAGAAGCTTTCTTTAAACTTATTTTCTCGTTGTTTTTGTCAAACATGTCGGATGAATCAAACAATAATGCAGACGGCAATATCGTGTGCTACTCGCCATCGATGATAACGACGAATGGTATATGGCAAGGAGACAACCCTTTGGACTATTCTCTTCCTCTCTTCATTTTACAATTGACTCTTGTTGTCGTCGCCACTCGCATTTTCGTCTTCCTCCTCAAGCCCTTTCGCCAGCCTCGTGTCATATCAGAAATTTTGGGCGGACTCGTATTGGGTCCTTCGGTGCTAGGGCGAAGCAAGGAATTCGCGTCAGCAATGTTCCCTCTCAGAAGCGTCATGGTCATCGAAACCATGGCCAATGTGGGTCTCCTCTACTTCCTCTTCCTCGTCGGCGTCGAGATGGACCTCCTTGTCTTACGACGTGTCGGTCGGAAGGCCGTAGCCACCGCCATCGCCGGCATGATCCTACCCTTCGCCATCGGAGCCGCCTTCTCCTACCTCCTTCATAGGCAGAGCGGAGCTTCTGTTAACCAAGGCACCTACATCTTGTTCCTCGGCGTCGCCCTTTCCGTCACCGCCTTCCCTGTTCTCGCCCGCATTCTCGCAGAGCTCAAGCTCGTCAACACGGAGCTCGGTCGGATCGCGCTTTCTTCCGCTCTGATCAATGATGTCTGCGCTTGGGTTTTACTAGCCCTAGCGATTGCCCTAGCGGAGAACGAAAGACCGTCATTGGCTTCGCTCTGGGTCATCCTCTCCAGCATGGCCTTCGTCGGATTTTGCATCTTCGTCGTGAGACCGGCAGTTTCGTGGGTGGTACGAAAAACACCAGACGGCGAATCGTTCAGTGATTTCTACATATGCCTGATTCTGGCAGGGGTTATGATTTCGGGTTTCATCACCGATGCGATCGGGACACACTCTGTATTTGGGGCATTTGTGTTCGGATTGTCGATCCCGAACGGGCCGCTGGGCGTGACGCTGGTGGAGAAGCTTGAGGACTTCGTGTCGGGACTGTTGCTTCCGCTGTTCTTCGCGATCAGCGGGTTAAAGACGAACATTGGGGCTATTAACGGAGGGTCGACGTGGGCGGTTCTGTTGCTGGTGATCTTTCTGGCGTGCATTGGGAAGGTGATTGGGACGCTGGTGGTTGCACTCTTCTATCAGTTGCCGATTCGGGAAGGCATTGCGCTGGGATTGCTCATGAACACCAAAGGCCTCGTGGAGATCATTGTGCTCAATGTTGGAAAGGACCAGAAGGTGCTGGACGACGAGTCGTTTTCGATCATGGTGATAATAACAATAATAATGACAGCCATCATAGTCCCTCTCGTCTCCGCCCTCCACAAACCCTCCCGGAGGTTCATCTCATACAAACGCCGAACCATCCAGATGTCCAAACGCGACACAGAGTTCCGAATCCTGGCCTGCATCCACACCCCCCGCAATATACCCACCACCATCAACCTCCTCGAAGCCTCCAACCCCACCAAGAAATCCCCCATCTGCGTCTACGTCCTCCACCTCGTCGAGCTCACTGGCCGCACCTCCGCCATGCTCATCGTCCACGACACCCGCAAACCCGACTGCCCCGCCCTCAACCGGACCCAAGCCCAGTCTGACCACATCATCAACGCCTTTGAGAACTACGAGCAGCACGCCGGCTTCGTCACAGTCCAGCCCCTTACCGCCATCTCCCCTTACTCCACCATGCACGAGGACATCTGCAATTTGGCCGAAGACAAGCGCGTCGCCTTCATCATCGTCCCCTTCCACAAGCAACAGACCGTCGACGGCGGAATGGAGGCAACGAACATGTCTTACCGCACGATTAACCAGAACGTGCTGGCCAACGCGCCCTGCTCTGTTGGGATCCTCGTGGACAGGGGTTTGAGCGGATCTAACAGATTGGCCGCGAATCAGATGTCACACCACGTCGCAATTCTGTTCTTCGGCGGGCCAGACGACAGAGAGGCGTTGTCGTATGCGGGGAGGATGTCGGATCACCCCGGGATAAGCTTAACGGTGCTGCGATTCGTCGCCGGGGAGGACACCGCCGAGGGGGGGAACGGCGGCAGCAATTTCGGGATGCTGACGGTGGAGACGGACGTGGAGAGGGAGAAGCAGATGGACGAGCGTTTCATCAACGATTTCAAGATGAAGTACGCAAACGACGATTCGGTGGCGTATATAGAGAAAGTGGTGAACAACGGCGAGCAAACGGTGGCGGCGATAAGGTCGATGGACGACATTCATGATCTGTTTATAGTGGGGAGGGGGCAGGGGACGGCGTCGCCATTGACGGCGGGGCTGACGGACTGGAGCGAGTGTCCAGAATTAGGGGCAATCGGCGATTTGCTGGCTTCGTCAGATTTCGCGGCGACGGCATCGGTGCTGGTGGTGCAGCAGTACGTCGGATCTGGGTCGGTGGGGGATCATGGGTTGGGGACGCCGGACAATACAATGCAGAGCAACGAAGAGTATATACAATAG	2508	0.5502	MTLHISIEAFFKLIFSLFLSNMSDESNNNADGNIVCYSPSMITTNGIWQGDNPLDYSLPLFILQLTLVVVATRIFVFLLKPFRQPRVISEILGGLVLGPSVLGRSKEFASAMFPLRSVMVIETMANVGLLYFLFLVGVEMDLLVLRRVGRKAVATAIAGMILPFAIGAAFSYLLHRQSGASVNQGTYILFLGVALSVTAFPVLARILAELKLVNTELGRIALSSALINDVCAWVLLALAIALAENERPSLASLWVILSSMAFVGFCIFVVRPAVSWVVRKTPDGESFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLSIPNGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTNIGAINGGSTWAVLLLVIFLACIGKVIGTLVVALFYQLPIREGIALGLLMNTKGLVEIIVLNVGKDQKVLDDESFSIMVIITIIMTAIIVPLVSALHKPSRRFISYKRRTIQMSKRDTEFRILACIHTPRNIPTTINLLEASNPTKKSPICVYVLHLVELTGRTSAMLIVHDTRKPDCPALNRTQAQSDHIINAFENYEQHAGFVTVQPLTAISPYSTMHEDICNLAEDKRVAFIIVPFHKQQTVDGGMEATNMSYRTINQNVLANAPCSVGILVDRGLSGSNRLAANQMSHHVAILFFGGPDDREALSYAGRMSDHPGISLTVLRFVAGEDTAEGGNGGSNFGMLTVETDVEREKQMDERFINDFKMKYANDDSVAYIEKVVNNGEQTVAAIRSMDDIHDLFIVGRGQGTASPLTAGLTDWSECPELGAIGDLLASSDFAATASVLVVQQYVGSGSVGDHGLGTPDNTMQSNEEYIQ	835

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa08g2435	835	MobiDBLite	consensus disorder prediction	819	835	-	-
	Bisa08g2435	835	PANTHER	CATION/H + ANTIPORTER	35	810	-	-
	Bisa08g2435	835	FunFam	Cation/H(+) antiporter 15	60	461	-	-
	Bisa08g2435	835	Gene3D	-	502	776	-	-
	Bisa08g2435	835	Pfam	Sodium/hydrogen exchanger family	67	450	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Bisa08g2435	835	Gene3D	-	60	460	IPR038770	-
	Bisa08g2435	835	MobiDBLite	consensus disorder prediction	816	835	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa08g2435	Bisa-ChrBisa08	57948515	57955433	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa08g2435	22	834	Antiporter Super Family	AT2G13620	71.166	0.0	1179