Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2422 ATGGGTGGATTATATCTGGAAATGAATGAATGGGACTTGCTGAATATAGTGGAGATTGAAACTCATGTACAACCTGGATCTCTGTCTTTTTATGTTGATTATGGACAGAACAGACCAAGAGATGCAAAAGCTCTAGCTCAGAGTGATGTTGTGATTACTACATATGGTGTCTTAACCTCTGAATTTTCCAGTGAGAATGCAGAGGATGATGGTGGACTTTTCTCAATTCGGTGGTTTAGGGTAGTACTTGATGAGGCACATACAATAAAATCTTTCAAAAGCCAAATTTCTATTCTATTGCTTTGGTTGCTGACAGACAGACGTTGGTGTCTTACTGGAACTCCTATTCAGGGAACTGAAGCTGCATCCAGGCGATTCAAAATCAACTACACTTTCATATTTGGCTTCAAGCAAGGAACAGAGTTGGGTTACAGAGAAGTCCTTCTTCTTAGTTCTGGCCTCACAGTGCTCACATTGGCTGCTAATCTCTCAAACTTGGAAATGGAGATGAATCAAAGAACAAAGAGTTTTCCAACTTTCACAGAATTGGTCCCTTTAGGTCTTATCTTTGTTGTGCTTTCCATAACATTATGCCCCTTCAACATTATATATAAATCCAGCCGCTTCTTCCTTATCCAATGTGTATTTCATCGTATTTGTGCTCTTTACAAGGTAAAGGAGAAGAAAGAATTTGAAGCAGGTGATCAAGAGCAAAAGGCCATCTAA 726 0.3926 MGGLYLEMNEWDLLNIVEIETHVQPGSLSFYVDYGQNRPRDAKALAQSDVVITTYGVLTSEFSSENAEDDGGLFSIRWFRVVLDEAHTIKSFKSQISILLLWLLTDRRWCLTGTPIQGTEAASRRFKINYTFIFGFKQGTELGYREVLLLSSGLTVLTLAANLSNLEMEMNQRTKSFPTFTELVPLGLIFVVLSITLCPFNIIYKSSRFFLIQCVFHRICALYKVKEKKEFEAGDQEQKAI 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2422 241 Gene3D - 7 120 IPR038718 -
Bisa08g2422 241 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 18 133 IPR014001 -
Bisa08g2422 241 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 18 118 - -
Bisa08g2422 241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 120 IPR027417 -
Bisa08g2422 241 Pfam EXS family 124 226 IPR004342 GO:0016020
Bisa08g2422 241 Pfam SNF2-related domain 18 118 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2422 Bisa-ChrBisa08 57785473 57789301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2422 17 117 RAD5 or RAD16-like Gene Family AT5G22750 71.287 3.37e-45 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bisa08g2422 EXS 1.5e-11 CL0182