Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2417 ATGGAAAATCCGTCTTCTGAATTCATCTTCCGTTCTAAACTCCCTGACATTCCCATCCCCATCCACCTCCCGCTACACACCTACTGCTTCGAGAACCTACCGCAGTTCAAAGACCGACCATGCCTCATCAACGGTGAGACCGGCGAGATCCTCACCTACTCCGCCGTGGAGCTCACCGCCCGCCGCGTGGCCGCCGGCCTCAACAACCTCGGCATCGGACAAGGTGACGTTATCATGCTCGTCCTCCGGAACTGTCCCCAGTTCGCCCTCGCCTTCCTCGGCGCCTCCTTCCGCGGCGCAATCGCCACCACGGCGAACCCCTTCTTCACTCCCGCCGAGCTGGCCAAACAAGCGGCGGCATCCAAAGCCAAGCTGATCATAACTCAGTCGGCTTACGTCGATAAAATGAAGGATTTCGCGGAATCCAACGGCGTCGTATTGATGTGCGTCGATCAGCCAAAATTAGAAGGCGTTCTACATTTCTCTGAACTCACCCAATCCGACGAGGCTGATATGCCAGCTGTCAATATTAGCCCAGACGACGTCGTGGCACTTCCTTATTCGTCTGGTACTTCTGGCGTTCCCAAGGGGGCGATGCTCATGCACAAGAATATGGTAACCACAGTGGCTCAGCTGGTGGACGGAGAAAACCCGAACCAGTATACTAGCAGTGAGGATGTGCTTCTCTGTGTGCTTCCAATGTTTCATATCTACGCGCTTAACTCGATTTTGCTATGCGGAATTCGAGCCGGGGCAGCCATCTTGATCATGAGCAAATTTGAGATCACCACGTTGTTGGAGCTGATCCAGAAATACAAGGTCACGGTGGCGTCGTTTGTGCCACCCATCCTATTGGCCATCGTGAAGAGCGAGGATGTTGAGCGCTACGATTTGTCGTCTATTAGAATGGTGGTGACTGGGGCCGCGCCAGTCAGCGTGGAGCTTGAGCAAGCTTTGAGGGCCAAGCTTCCCCACGCTAAACTAGGACAGGGGTATGGGATGACGGAGGCTGGTCCTCTATCAATAAGCTTAGCGTTTGCGAAGGAGCCAACGGAGATGAAATCAGGAGCGTGCGGGAGCGTAATAAGAAATTCTGAGATGAAAATTGTTGACATTAAAACAGGAGCTTCGCTTCCAAGAAACAAATCGGGTGAAATTTGCATTAGGGGCAATCAAGTTATGAAAGGTTATCTAAACGACCCGGAGGCCACAGAAAGCACGATAGACAAAGAGGGATGGCTTCACACAGGTGACATTGGATACATAGACGATGATGATCAGCTGTTCATTGTGGATCGGTTGAAGGAGATCATCAAATACAAAGGCTTCCAAGTGGCACCCGCTGAGCTGGAGGCTATGTTGATTGCCCACCCAAGCATCTCTGATGCCGCTGTTATACCGATGAAAGATGAAGCTGCTGGAGAGGTTCCGGTTGCGTTTGTTGTAAGATCCAATGGCTCTAAAGTCTCCGAAGATGAAATTAAGCGTCACATTTCGCAACAGGTGGTGTATTACAAGAGAATCCATAAAGTTTTCTTCACCGACGCTATTCCTAAAGCTGCCTCAGGCAAAATTTTGAGAAAGGATTTAAAAGCAAGGATCGAAGCAGGTATGGACAACTAG 1623 0.5096 MENPSSEFIFRSKLPDIPIPIHLPLHTYCFENLPQFKDRPCLINGETGEILTYSAVELTARRVAAGLNNLGIGQGDVIMLVLRNCPQFALAFLGASFRGAIATTANPFFTPAELAKQAAASKAKLIITQSAYVDKMKDFAESNGVVLMCVDQPKLEGVLHFSELTQSDEADMPAVNISPDDVVALPYSSGTSGVPKGAMLMHKNMVTTVAQLVDGENPNQYTSSEDVLLCVLPMFHIYALNSILLCGIRAGAAILIMSKFEITTLLELIQKYKVTVASFVPPILLAIVKSEDVERYDLSSIRMVVTGAAPVSVELEQALRAKLPHAKLGQGYGMTEAGPLSISLAFAKEPTEMKSGACGSVIRNSEMKIVDIKTGASLPRNKSGEICIRGNQVMKGYLNDPEATESTIDKEGWLHTGDIGYIDDDDQLFIVDRLKEIIKYKGFQVAPAELEAMLIAHPSISDAAVIPMKDEAAGEVPVAFVVRSNGSKVSEDEIKRHISQQVVYYKRIHKVFFTDAIPKAASGKILRKDLKARIEAGMDN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2417 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 532 - -
Bisa08g2417 540 FunFam Long-chain-fatty-acid--CoA ligase FadD 11 435 - -
Bisa08g2417 540 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Bisa08g2417 540 Pfam AMP-binding enzyme 32 440 IPR000873 -
Bisa08g2417 540 Gene3D - 435 537 IPR045851 -
Bisa08g2417 540 Gene3D - 2 434 IPR042099 -
Bisa08g2417 540 CDD 4CL 19 530 - -
Bisa08g2417 540 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Bisa08g2417 540 SUPERFAMILY Acetyl-CoA synthetase-like 14 536 - -
Bisa08g2417 540 FunFam 4-coumarate--CoA ligase 2 436 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2417 Bisa-ChrBisa08 57666395 57673228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2417 3 502 Monolignol Biosynthesis Gene Families AT1G51680 67.717 0.0 682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2417 08 57666395 57673228 Bisa08g2417 08 57666395 57673228 ECH