Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2416 ATGAGTAATTTCCGTCCTAACATTTCTCTTCATCATCCTTCTTCAAGTCTACCTGATGATATTGAGACTAACCTCAACCTCGATCTTCTTCTTGAGACTTCTTCATCTTCTGCTTCATCTTCACCCGTGATCAGTAATATTAACATAGAGCCTCGGATATTCTCATGCAACTATTGCCAGAGAAAGTTCTACAGCTCCCAAGCTCTGGGAGGCCACCAAAATGCTCACAAGCTCGAAAGGACGCTGGCCAAGAAGAGCAGGGAGCTCAGTTCCGCCATGCAAAGTTTTGGGGTTTCGGAGCAGCACAGGTCAAGCTCAAGCTCAAGCAGCTTCGGCGGTTCAGATTCTAACCCTCTCAGGCGCCTCGGCTCACCAATTGGTGAGTTGGAGAACCTGGGTCGAGCCGGCAGACTAGCCGGAGGGGTTAGCTATGGAAGAAGAGAGTTCAGCCATGACTCCAACCCGGCCGGCTCGCCCGATTATTCCGCTGAAGTTGTTCAAGAGGATATTGATGACCAACTTGACTTGTCCTTAAAACTTTGA 543 0.4899 MSNFRPNISLHHPSSSLPDDIETNLNLDLLLETSSSSASSSPVISNINIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAMQSFGVSEQHRSSSSSSSFGGSDSNPLRRLGSPIGELENLGRAGRLAGGVSYGRREFSHDSNPAGSPDYSAEVVQEDIDDQLDLSLKL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2416 180 Coils Coil 75 95 - -
Bisa08g2416 180 Gene3D Classic Zinc Finger 37 111 - -
Bisa08g2416 180 FunFam Zinc finger protein 2 31 102 - -
Bisa08g2416 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Bisa08g2416 180 SUPERFAMILY beta-beta-alpha zinc fingers 51 81 IPR036236 -
Bisa08g2416 180 MobiDBLite consensus disorder prediction 145 165 - -
Bisa08g2416 180 MobiDBLite consensus disorder prediction 89 117 - -
Bisa08g2416 180 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Bisa08g2416 180 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 19 115 IPR044246 GO:0009788
Bisa08g2416 180 MobiDBLite consensus disorder prediction 89 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2416 Bisa-ChrBisa08 57612405 57612947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2416 3 180 C2H2 Transcription Factor Family AT5G57520 45.556 6.22e-26 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa08g2416 None None None