Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2406 ATGGGGTTTGCAAGCAATAGCATCGGCAAGTACCGGCTAGGGCGTACAATTGGGGAAGGTACATTCGCGAAGGTGAAGCTGGGTGTGAACAGCCACAATGGCCAATTCGTTGCGATCAAGGTCATAGACAAGACAATGGTCATGCAAAGCGATCTCAGGTATCAGGTCCAAAGGGAGATAAGAACAATGAAGCTTCTGCACCATCCCAATATTGTAAGAATTCACGAAGTTAACGGCACAAAGACGAGAATATATATTGTGATGGATTATGTAGCAGGAGGACGACTATCAGACAAGCTGTCTTATGCCCAAAGGTTGAATGAATGTGAAGCAAGGAAACTTTTCCAGCAACTTATTGATGCTGTGGACTACTGCCATAACAAGGGAGTTTACCACAGAGATCTCAAGCCAGAAAACTTGCTTCTCGACAGCAAAGGAAATCTCAAAGTGTCTGATTTCGGACTGAGTGCACTGCGAAAGCCTGATAATGTTCTAACTACAGCGTGTGGCTCACCGTGCTATGTGGCACCTGAGCTGCTATCTAATAAGGGCTACGAAGGAGCAGCTGCTGATGTTTGGTCATGCGGAGTGATCCTTTTTGAATTACTTGCAGGTCATCGTCCATTTGATGACCCCAACTTGATGAACTTGTATAAGAAGATATACAGAGCAGACTATAAATGCCCAACATGGTTTACACAAAGTCAAAAGAAACTAATTGCCAAAATACTTGAACCACGTGCTGAAAAGCGAATCACTATACCAGAGATCATAGAAGATGACTGGTTTCAAAAAGATTATGTGCCTGCTTTTGGATCTGAATGTGATCGGAACATTCAACTGGATGATGTTAATGCTGCTTTTGATTCAGTTGAGGAGAGTGTCTTAGAGACAACTATTCCCAAGTCATCAAGTTTCATTAATGCTTTCCAACTAATAGCCATGTCTCAGGACCTTGATCTATCAGGCCTTTTCGAAGAACAGGGCCAGAAAAAGCAGAGAACAAGGCTTGGATCCAAGCACAACATCTCTGAAACCATAGAAAAAATAGAAACTGCTGCAACAGATGCGAGACTGTCAATAGAAAAACTGAACAACTTCACGATAAAAATGCACTCCAAACAGATGCTTACTAGATGTTCCAGATCATACTATGACCTATCAGCCAAGGTGATTGAAGTTGCTCCCACTCATTGTGTTGTTGAGATATCAAAATCTGCGGGAGATTTAAGAATGTACAATAAATTTTGTGAGAGTCTATCAAGTCTGCTGACAGAAGAATCTAGTGTGCCATCACAAACACAAGAGTCTGTGGAAGTATGCATCAATGGAGAAAACAACCAAGAAACTGTGTTGTAA 1359 0.4194 MGFASNSIGKYRLGRTIGEGTFAKVKLGVNSHNGQFVAIKVIDKTMVMQSDLRYQVQREIRTMKLLHHPNIVRIHEVNGTKTRIYIVMDYVAGGRLSDKLSYAQRLNECEARKLFQQLIDAVDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALRKPDNVLTTACGSPCYVAPELLSNKGYEGAAADVWSCGVILFELLAGHRPFDDPNLMNLYKKIYRADYKCPTWFTQSQKKLIAKILEPRAEKRITIPEIIEDDWFQKDYVPAFGSECDRNIQLDDVNAAFDSVEESVLETTIPKSSSFINAFQLIAMSQDLDLSGLFEEQGQKKQRTRLGSKHNISETIEKIETAATDARLSIEKLNNFTIKMHSKQMLTRCSRSYYDLSAKVIEVAPTHCVVEISKSAGDLRMYNKFCESLSSLLTEESSVPSQTQESVEVCINGENNQETVL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2406 452 FunFam Non-specific serine/threonine protein kinase 4 303 - -
Bisa08g2406 452 SMART serkin_6 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2406 452 Gene3D Transferase(Phosphotransferase) domain 1 91 285 - -
Bisa08g2406 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bisa08g2406 452 Gene3D Kinase associated domain 1, KA1 302 426 - -
Bisa08g2406 452 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Bisa08g2406 452 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bisa08g2406 452 Pfam Protein kinase domain 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2406 452 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Bisa08g2406 452 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 419 - -
Bisa08g2406 452 FunFam Non-specific serine/threonine protein kinase 302 428 - -
Bisa08g2406 452 FunFam Non-specific serine/threonine protein kinase 3 90 - -
Bisa08g2406 452 CDD CIPK_C 308 424 - -
Bisa08g2406 452 Pfam NAF domain 305 363 IPR004041 GO:0007165
Bisa08g2406 452 SUPERFAMILY Protein kinase-like (PK-like) 8 310 IPR011009 -
Bisa08g2406 452 ProSiteProfiles Protein kinase domain profile. 11 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2406 Bisa-ChrBisa08 57285853 57289272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2406 8 420 CBL-interacting serine-threonine protein kinases AT1G01140 50.120 1.81e-144 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa08g2406 Pkinase 8.6e-72 CL0016