Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2384 ATGCGAAATCCCAGGTCAGTGAAGCTAGAATTTTTTTGGAAGTGGATGAAAGGTCTTGGAAAATGCAGGTTTGAAAAGAAGAAGATGAGCCTCTTGGAGAGGGAAAATGCTGTAAAACTGAGTGCAGATTTAGCCATGGCTTCCACCAGAAATCATGATCAATGCAGGTGTTGGATTTGGAGCCGAGCCCTTATTGGAAATTACGCTTCGAGAGGCCGCAAAAGCAGAGTCCTTACGGAGCGCATAATAGGGTCGCTAGAGTGCCAGAGGCTGAGGAAAGCTTTCACTTCGTCTTCGTCAATTCTTAATAGCAAGAACAACAGAAAGATTAGAAGAAGCAGGAAGATCTTGAACAGAAGCCGTACGATCCGTAGAGCCAATAAGATGAAGATCTTGAAGAGAACACGAATGCTTAGGAGTCTCGTTCCAGGGGGAGACCTTATGGACGATGAGTCCTTACTTGAAGAAACCCTAGATTATGTACAATCCCTGCGAGCTCAAGTTCAAGTCATGCACTCTCTTCTCAATAATTCCCACCTCTTTATATAG 549 0.4426 MRNPRSVKLEFFWKWMKGLGKCRFEKKKMSLLERENAVKLSADLAMASTRNHDQCRCWIWSRALIGNYASRGRKSRVLTERIIGSLECQRLRKAFTSSSSILNSKNNRKIRRSRKILNRSRTIRRANKMKILKRTRMLRSLVPGGDLMDDESLLEETLDYVQSLRAQVQVMHSLLNNSHLFI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2384 182 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 173 IPR036638 GO:0046983
Bisa08g2384 182 CDD bHLH_AtIBH1_like 120 175 IPR044549 GO:0006355
Bisa08g2384 182 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 176 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2384 Bisa-ChrBisa08 56733058 56733606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2384 1 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 35.638 4.10e-24 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2384 08 56733058 56733606 Bisa08g2384 08 56733058 56733606 ECH