Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2363 ATGAGGTCTTCTCTGATTCCACTTGCAAACAAGGTGAGATCTAGGCTGTTGTCATCGCCACTGGCATCAATACCTTCTTTGGCAAGAGTAGGAATCACTGAGGTGCATTTCGTACCCTTCAATCCTGTGGAGAAGCGCACAGCCATCACCTACATTGATAAACATGGTAACTGGCATAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATCGAGCTTTGCGGTCTTAAGGGAGAGGTTGAACAAAAGGCACATGACATCATAGCCTCATTTGCTGACCGTGGTCTACGGTCCTTGGCTGTTGCTCGCCAGGTCTTAGGTCTGTTGCCATTGTTTGACCCTCCAAGGCACGATAGTGCAGAGACTATCCGTCGTGCTCTTGAACTTGGTGTTAATGTTAAGATGATAACTGGTGACCAACTTGCCATCGGAAAAGAAACTGCTCGCAGGCTTGGGATGGGTAGCAATATGTATCCTTCAACCTCCCTTCTTGGCAATCACACGGGGGAACTCACTGCATCCATACCAATTGACCAACTCATAGAGACAGCTGATGGATTTGCCGGAGTCTTCCCTGTAGCTGATGCAACTGACGCTGCCAGGAGTGCTTCAGACATTGTTTTGACAGAGCCTGGGCTTAGTGTAATTGTAAGTGCAGTGTTAACTAGTAGGGCCATCTTCCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATTACAATCCGTGTTGTAGTTGGGTTCCTGCTTCTTGCTTTAATATGGAAGTTTGACTTCTCCCCCTTCATGGTCTTGATCATCGCCATTTTGAATGACGTCACCATCATGACCATATCAAAGGATAAAGTGAAGCCATTCCCTAAGCCTGATTCATGGAAGCTTGACGAAATCTTTGCCACAGGCGTTATTCTTGGAGCTTACATGGCTATCATGACTGTGGTCTTCTTTTGTATCATTAAAGACACACAATTCTTCACTAAAACTTTTGGCGTCAGATCAATTGCAAATAGCAACGAAGAGCTTAACTCTGCTATTTACCTTCAAGTTGCCACTCTTTTTGCTGGGTACCCACGGTGGGAGTTTTGTCGAATCAGTGGAATTGGTTGGGGATGGGCAGGAGTAATCTGGCTTTTCACTCTTCTTACCTACGTCCCTCTTGATATTCTCAAGTTCTTAATCCATTTGTGCTTAACTGGTAGTGCATGGGACAACACGCTTCAAAACAAGGTCTGA 1230 0.4553 MRSSLIPLANKVRSRLLSSPLASIPSLARVGITEVHFVPFNPVEKRTAITYIDKHGNWHRSSKGAPEQIIELCGLKGEVEQKAHDIIASFADRGLRSLAVARQVLGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETARRLGMGSNMYPSTSLLGNHTGELTASIPIDQLIETADGFAGVFPVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRVVVGFLLLALIWKFDFSPFMVLIIAILNDVTIMTISKDKVKPFPKPDSWKLDEIFATGVILGAYMAIMTVVFFCIIKDTQFFTKTFGVRSIANSNEELNSAIYLQVATLFAGYPRWEFCRISGIGWGWAGVIWLFTLLTYVPLDILKFLIHLCLTGSAWDNTLQNKV 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2363 409 SUPERFAMILY HAD-like 104 219 IPR036412 -
Bisa08g2363 409 Gene3D - 351 394 - -
Bisa08g2363 409 Gene3D - 211 350 - -
Bisa08g2363 409 Gene3D - 27 111 IPR023299 GO:0000166
Bisa08g2363 409 PRINTS P-type cation-transporting ATPase superfamily signature 128 138 - -
Bisa08g2363 409 PRINTS P-type cation-transporting ATPase superfamily signature 106 117 - -
Bisa08g2363 409 PRINTS P-type cation-transporting ATPase superfamily signature 196 208 - -
Bisa08g2363 409 SUPERFAMILY Calcium ATPase, transmembrane domain M 222 394 IPR023298 -
Bisa08g2363 409 Gene3D - 193 210 IPR023214 -
Bisa08g2363 409 Gene3D - 112 191 IPR023214 -
Bisa08g2363 409 PRINTS H+-transporting ATPase (proton pump) signature 83 101 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa08g2363 409 PRINTS H+-transporting ATPase (proton pump) signature 183 199 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa08g2363 409 FunFam Plasma membrane ATPase 100 192 - -
Bisa08g2363 409 PANTHER CALCIUM-TRANSPORTING ATPASE 192 408 - -
Bisa08g2363 409 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 31 116 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2363 Bisa-ChrBisa08 56305996 56317324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2363 25 408 Primary Pumps ATPases AT3G42640 62.579 0.0 578