Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2345 ATGGAAACTAGCACTGGACTTTTTGCAGGATCTCATAACAGCAACGAGCTTGTGGTCATACAAGAACATGAAGAGCCTAAGCCTGTGAAGAACTTAGATGGTCAGCAGTGCGAGATATGTGGTGATTCTGTGGGATTTACAGTGGACGGAGAATTGTTTGTGGCTTGTGAAGAGTGTGGTTTCCCTGCGTGCAGGCCATGTTATGAGTATGAAAGAAGGGAAGGGACTCAAGTTTGCCCTCAGTGCCAGACTAGATACAAGCGGATCAAAGGAAGCCCAAGAGTGGAGGGAGATGAAGATGAAGATGATGTGGATGATATTGAACATGAGTTCAAAATGGAAGAGGAAAAGAACAAGTTCAGGCTATGCAGAGGAGATGATGAGAATGCTAAATCACCTCCAGTAGTAGCAGAGGTGAATGGAGAGATTCCCATACCTACTTTTAGTCTTGGAGAACCTGGAACTGCAAAGTTGAATGAAAAGAAAGAGATAACAGATGACCAGAAGTTGCATCAAGGCAATCTGTGCCCTGAAACTGATGCATCAGTCGACCCTGAAAAGGCCATGAGTGATGAAGCTAGACAGCCTCTCTCAAGGAAAGTAGCTATACCATCAGGCAAACTCAGTCCTTACAGAATGATGGTTGTGGCTCGGCTTATGATCCTGGTATTGTTCCTTCAGTACAGAGTCATGCACCCTGTGCCTGATGCAGTTGGACTCTGGCTTACATCTGTAATATGTGAAATATGGCTTACGTTATCCTGGATAATTGATCAGCTTCCCAAATGGTTTCCCATCGACCGGGAGACGTACCTTGATCGGCTTTCAATCAGGTTTGAACCAGAGAACAAGCCAAACTTATTTTCTCCACTAGATATCTTTATCACTACTGTGGATCCAATAAAGGAACCTCCGCTAGTTACAGCCAATACAGTTCTTTCAATCTTGGCCATGGATTATCCTGTTGATAAAATCTCATGCTACGTTTCTGATGATGGAGCTTCCATGCTCACCTTTGAAGCTCTCCAAGAAACTGCAAAATTTGCCAAGAAGTGGGTCCCCTTCTGCAAAAAATATTCTACAGAGCCTCGAGCACCGGAGAAGTACTTCTGTGAAAAGATTGATTTCCTAAAGGATAAGGTCCAGTCTACATATGTAAGAGAACGCCGTACTATGAAGAGAGAATATGAAGAGTTCAAAGTCAGGATCAATGCACTTGTGGCTAAAGCCATGAGAGTTCCCCAAGAAGGGTGGACCATGAAAGATGGGACACCATGGCCAGGAAACAATACGAATGACCATCCAGGTATGATACAAATTCTTCTTGCTCAGAGTGGAGGCCTTCATGGAAATGAACTTCCCTCTCTTGTCTACCTGTCTCGCGAGAAAAGACCTGGGTTTCAACATCACGGCAAAGCTGGTGCCTTGAATGCATTGCTTCGAGTATCTGCTGCGCTAAGCAATGCTCCTTTCGTTCTCAACTTGGATTGCAATCACTATGTGAATAACAGCAAGGTTGTGAGAGAGGCTATGTGTTTCCTGATGGACCTACAAGTTGGGAAAAGCATTTCCTTTGTCCAGTTCCCGCAAAGATTTGACAGCCTTGACAAGCATGATCGTTATGCCAACAGAAATACTGTTTTGTTCGATATTAACATGAGATGCTTGGATGGACTTCAGGGACCTTTTTATGTTGGAACAGGATGTATCTTCAGAAGGAAAGCTTTATATGGCGGTGACCCTCCAAAGTCTTCAAAGCGCCCAAAAATGGTAGGCTGTGGCTGTTGTCCATGTTTTGGGTCTCGCAAGAAGCTACAAGTGCACTCTAAGCATGATGGAAATGAAGACGATGCAAACATAACAGGAACAGATGAAGACAAACAGCTTTTAAAGTCGCAGCTAAATTTCGAAAATAAATTTGGGAAGTCTGACTTTTTTGTGAACTCTTCCATTACGGAAGAGAGTGCTGTTCCTTCTTCTTTTAATCAGTCGACCCTGCTTAAGGAAGCCATTCATGTCATGAGTTGTAGCTACGAAGACAAAACCTTGTGGGGATACGAGGTAGGTTGGAACTATGGATCCATTTCATCAGATATTCTAACAGGTTTGAAGATGCACTATCGTGGTTGGAGATCAGTATACTGCATGCCAAAACGAGCTGCGTTCAGGGGCACTGCTACCATCAACCTTTCAGAACGACTAACCCAGATAAGCACTGTTGCAAGTCTCCTCTTTATTGCATTGTTCATCTCAATCTGTGCTTCCAGTGTTCTTGAGTTGAGATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAATGAGCAGTTCTGGGTTATTGGCAGTGTGTCAGCGCAGCTCTTCGCGATTGTGAGAGGCCTTCTGAAGGCTGTGGCTAAAGTTGACATAAAATTCAGTGTGGTATCAAAGATACCAGATGATGGGGAGTTCCAGGATCTATACACCTTTAGATGGACTGCCCTCATAATACCTCCAACCACTATCACAATCGTTAACCTTGTTGGTATAGTAGCTGGGTTTACAGATGCCATAAATAGTGGTGGGCATTCATGGGGAGCACTACTTGGGAAGCTCTTCTTCTCTTTCTGGGTTCTTCTCCATCTTTATCCATTCCTTAAAGGTCTCATGGGAAGGCAAAACAGAACACCAACCCTTGTTGTCATATGGTCAGTGCTTTTGGCATCTATCTTCTCCTTGGTTTGGGTAAGAATTGATCCTTTTGTGTTGAAAACAAAAGGACCTGACGTCAAGCAATGTGGAATCAGTTGCTGA 2790 0.4391 METSTGLFAGSHNSNELVVIQEHEEPKPVKNLDGQQCEICGDSVGFTVDGELFVACEECGFPACRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDVDDIEHEFKMEEEKNKFRLCRGDDENAKSPPVVAEVNGEIPIPTFSLGEPGTAKLNEKKEITDDQKLHQGNLCPETDASVDPEKAMSDEARQPLSRKVAIPSGKLSPYRMMVVARLMILVLFLQYRVMHPVPDAVGLWLTSVICEIWLTLSWIIDQLPKWFPIDRETYLDRLSIRFEPENKPNLFSPLDIFITTVDPIKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALQETAKFAKKWVPFCKKYSTEPRAPEKYFCEKIDFLKDKVQSTYVRERRTMKREYEEFKVRINALVAKAMRVPQEGWTMKDGTPWPGNNTNDHPGMIQILLAQSGGLHGNELPSLVYLSREKRPGFQHHGKAGALNALLRVSAALSNAPFVLNLDCNHYVNNSKVVREAMCFLMDLQVGKSISFVQFPQRFDSLDKHDRYANRNTVLFDINMRCLDGLQGPFYVGTGCIFRRKALYGGDPPKSSKRPKMVGCGCCPCFGSRKKLQVHSKHDGNEDDANITGTDEDKQLLKSQLNFENKFGKSDFFVNSSITEESAVPSSFNQSTLLKEAIHVMSCSYEDKTLWGYEVGWNYGSISSDILTGLKMHYRGWRSVYCMPKRAAFRGTATINLSERLTQISTVASLLFIALFISICASSVLELRWSGVSIEEWWRNEQFWVIGSVSAQLFAIVRGLLKAVAKVDIKFSVVSKIPDDGEFQDLYTFRWTALIIPPTTITIVNLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLLHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2345 929 SUPERFAMILY Nucleotide-diphospho-sugar transferases 303 744 IPR029044 -
Bisa08g2345 929 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 194 737 - -
Bisa08g2345 929 SUPERFAMILY RING/U-box 22 107 - -
Bisa08g2345 929 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Bisa08g2345 929 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Bisa08g2345 929 Coils Coil 389 409 - -
Bisa08g2345 929 CDD mRING-HC-C4C4_CesA 35 85 - -
Bisa08g2345 929 FunFam Cellulose synthase 19 110 - -
Bisa08g2345 929 MobiDBLite consensus disorder prediction 172 195 - -
Bisa08g2345 929 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 428 580 IPR029044 -
Bisa08g2345 929 Pfam Cellulose synthase 291 737 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2345 Bisa-ChrBisa08 55764958 55770770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2345 737 929 Cell Wall Biosynthesis AT5G17420 73.057 3.39e-91 310