Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2340 ATGAAGAAGGTAAGGAGAAAGGTTGGGAAGTATGAGGTGGGTCGAACCATTGGCGAAGGTACCTTCGCTAAGGTTAAATTTGCTAAAAACACCGAGACAGGGGAGAGCGTGGCTATTAAAGTGATGGCTAAGAGCACCATTCTTGAGCACAAAATGGTTGAACAGATTAAAAGAGAGATATCGATTATGAAAATTGTCAGGCATCCTAATATAGTTAGGTGGCATGAGGTTTTGGCCAGCCAGACCAAGATTTACATAATTCTAGAGTTTGTCATGGGAGGAGAATTGTATGATGAAATTGTTCAGAAGGGGAGGCTTTCAGAAAATGAATCTAAGCGTTACTTTCAGCAGCTTGTAGATGCTGTTGCTCATTGTCACAGTAAGGGTGTGTATCATAGAGACTTGAAGCCTGAAAATCTACTTCTTGACGCTTTTGGGAATTTGAAGGTTTCTGACTTTGGACTGAGTGCCTTGATTAAGAAGGGTGTTGACCTCCTTTACACCACATGTGGAACTCCAAATTATGTTGCTCCCGAGGTGCTTAGCAATCTTGGTTATGATGGTGCAGCAGCTGATGTCTGGTCATGTGGAGTCATCCTTTATGTTCTCATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTGTCAACATTGTTCAAAAGGATTAATGCTGCAGAATTTACTTGCCCATTCTGGTTTTCTGCTGGGGCGAAGACATTATTGCATAAAATTCTGGATCCAAATCCAAAAACACGTATTCGAATTGAAGAAATAAGAAAAGACCCATGGTTCCAAAATGGTTATGTTCCTGTTAAACTTGGGGAAGATGAGGAAGTGAACTTGGATGATGTTCGGGCTGTTTTTGATGATATTGAGGACAAGTATGTAGCTGAAAAGTTGGAAAATACTGAAGGAGGTCCTTTGACAATGAATGCATTTGAGATGATAACCTTATCACAAGGGTTGAATCTATCAGCATTGTTCGACAGGCGTCAGGATTATGTAAAGCGACAAACTCGTTTTGTTTCCCGTAAACCTGCAAAAGATATAATTGCATCTATTGAAGCTGTTGCAAAGTCAATGGGCCTTAAGGTCCATTCTCGCAATTACAAGATGAGACTAGAAGGAGTATCTGCAAATAAAGCTGGACAACTTGCAGTGGTTTTGGAGGTCTTTGAAGTTGCACCATCCCTTTTCATGGTAGATGTTCGAAAGGCTGCTGGGGATACTCTTGAATATCACAAGTTCTACAAGAATCTTTGTGAAAAACTAGGAAATGTTATTTGGAGACCAGTAGAGCCCGTGCCAAGTTCTGGTATGCTTAGATAA 1329 0.4101 MKKVRRKVGKYEVGRTIGEGTFAKVKFAKNTETGESVAIKVMAKSTILEHKMVEQIKREISIMKIVRHPNIVRWHEVLASQTKIYIILEFVMGGELYDEIVQKGRLSENESKRYFQQLVDAVAHCHSKGVYHRDLKPENLLLDAFGNLKVSDFGLSALIKKGVDLLYTTCGTPNYVAPEVLSNLGYDGAAADVWSCGVILYVLMAGYLPFEEADLSTLFKRINAAEFTCPFWFSAGAKTLLHKILDPNPKTRIRIEEIRKDPWFQNGYVPVKLGEDEEVNLDDVRAVFDDIEDKYVAEKLENTEGGPLTMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFVSRKPAKDIIASIEAVAKSMGLKVHSRNYKMRLEGVSANKAGQLAVVLEVFEVAPSLFMVDVRKAAGDTLEYHKFYKNLCEKLGNVIWRPVEPVPSSGMLR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2340 442 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Bisa08g2340 442 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2340 442 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2340 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bisa08g2340 442 FunFam Non-specific serine/threonine protein kinase 304 430 - -
Bisa08g2340 442 SUPERFAMILY Protein kinase-like (PK-like) 8 274 IPR011009 -
Bisa08g2340 442 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Bisa08g2340 442 Pfam NAF domain 307 366 IPR004041 GO:0007165
Bisa08g2340 442 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bisa08g2340 442 CDD CIPK_C 311 424 - -
Bisa08g2340 442 Gene3D Transferase(Phosphotransferase) domain 1 91 271 - -
Bisa08g2340 442 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2340 442 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Bisa08g2340 442 Gene3D Kinase associated domain 1, KA1 304 430 - -
Bisa08g2340 442 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 415 - -
Bisa08g2340 442 FunFam Non-specific serine/threonine protein kinase 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2340 Bisa-ChrBisa08 55637352 55650999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2340 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 75.538 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa08g2340 Pkinase 4.5e-72 CL0016