Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2336 ATGTCGAGCAACAGCACCGATGTTGGCCCCGAGCAACTCTGCTATATCCCCTGCAACTTTTGCAACATTGTTCTTGCGGTTAGTGTTCCATGCAGTAGCCTATTTGACATCGTGACCGTTCGATGTGGACACTGCACAAATCTATGGTCCGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATCGCAAGATGTTCAGGATTCGGGGTTTTCCATTAATCCAGAGTATAGGACTGATCAGAAAGGATCTTCTTCAAGATGCAACATTAATAAGATTGCAATGCGAGCTCCCACCACACATACTGCAACTGATCAAGAAAGGGTTGTTAATAGGCCTCCCGAGAAGAGGCAGCGCGTCCCCTCTGCATATAATCAGTTCATAAAAGAAGAGATTCAGAGGATCAAGGCCAGTAACCCGGATATCAGTCATAGAGAAGCTTTCAGTACAGCTGCGAAGAATTGGGCACATTTCCCTCATATTCATTTCGGGTTGATGTTGGAGACCAATAATCAAGCTAGGATGGAGAATGGAATTCGGAGAACCATTTGA 549 0.4608 MSSNSTDVGPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSSQDVQDSGFSINPEYRTDQKGSSSRCNINKIAMRAPTTHTATDQERVVNRPPEKRQRVPSAYNQFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQARMENGIRRTI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2336 182 CDD HMG-box_SF 118 154 - -
Bisa08g2336 182 SUPERFAMILY HMG-box 106 157 IPR036910 -
Bisa08g2336 182 PANTHER PROTEIN YABBY 6-RELATED 1 173 IPR006780 GO:0007275
Bisa08g2336 182 Pfam YABBY protein 10 164 IPR006780 GO:0007275
Bisa08g2336 182 Gene3D High mobility group box domain 101 159 IPR036910 -
Bisa08g2336 182 FunFam axial regulator YABBY 5-like 102 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2336 Bisa-ChrBisa08 55481893 55485622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2336 8 174 C2C2-YABBY Transcription Factor Family AT2G26580 75.449 4.45e-87 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa08g2336 YABBY 6.6e-72 CL0114