Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2316 ATGGACCCGATGGACATCATTGGGAAATCGAAGGAAGACGCTTCGCTTCCCAAAGCAACTATGACAAAAATTATTAAAGAGATGCTACCCCCGGATGTACGCGTTGCAAGAGATGCTCAAGATCTACTCATTGAGTGTTGTGTAGAGTTTATAAACCTTGTGTCATCAGAGTCCAATGAAGTATGTAGCAGAGAGGAGAAACGGACAATTGCACCTGAGCATGTATTGAAGGCTTTAGAGGTTCTTGGATTTGGAGAGTATATTGAGGAAGTTTATGCAGCATATGAACAGCACAAGATTGAGACCATGCAGGACTCTTTAAAAGGAGGCAAATGGAGCAATGGAGTAGAGATGACCGAGGAAGAAGCATTAGCAGAGCAGCAGAGGATGTTTGCAGAGGCACGTGCTAGAATGAATGGTGAAACCACTGCATCCAAGCAGCCAGATACTAACCCAACTCTAGAGAGCTAA 471 0.4416 MDPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKIETMQDSLKGGKWSNGVEMTEEEALAEQQRMFAEARARMNGETTASKQPDTNPTLES 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2316 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Bisa08g2316 156 MobiDBLite consensus disorder prediction 140 156 - -
Bisa08g2316 156 FunFam Negative cofactor 2 beta 6 143 - -
Bisa08g2316 156 Gene3D Histone, subunit A 5 146 IPR009072 GO:0046982
Bisa08g2316 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Bisa08g2316 156 MobiDBLite consensus disorder prediction 135 156 - -
Bisa08g2316 156 SUPERFAMILY Histone-fold 12 142 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2316 Bisa-ChrBisa08 54997081 55005308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2316 1 151 CCAAT-DR1 Transcription Factor Family AT5G23090 81.699 1.08e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa08g2316 CBFD_NFYB_HMF 5.4e-22 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2316 08 54997081 55005308 Bisa08g2316 08 54997081 55005308 ECH