Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2274 ATGGAGACCTCAAGGCAGGAACTTGAGGCATTGAGAGGGAAGCAGGGCACAGAAACTGCAATTCTGGAGGAATTCATACCCTTGAAGCATCCGACAGCAGAAAGGTGTGGGATGGAATCAATCTTGTCTGATAAGGCGAATTGGATGATGTCTGCTCAATTGTGGAGCCAAACAAGTAGCGAAGAGACCAAGCCACAATCGTCCACAATGTTATCTTGTAAAGAAGCTGAAATTGGGCTGGGTCTGGACAGCAAACAGAGGAGTTATGGTGGAGGCGCCTTCCTTCCGTTCTCAAAGCAGGGTGTGCCAGAGCTGGGGCTTGCGTCTAGCGAGAAACAAACAAGGGAGGAGAAGAAATGCACAGAGCCTGAGAATGATCTGAAGAGGGAGAGTTCTGGGAAAGGAGGAGGCGATGATAATGGTGGAGAGGGAAGTGATCAAGGGAAAGAGACTAGTACGGTTTCATCGGAGGCAAAAAGAATAAACAGTAACAGTAACAGTAACACCACTTCCTCCACCACCCAAAATCATCGGAAAGCAAGGCGGTGTTGGTCGCCGGACTTGCACCGCCGATTTGTCAATGCTCTTCAGATGCTCGGTGGATCTCAAGTAGCCACCCCAAAACAGATAAGGGAGCTTATGAAAGTTGAGGGATTGACCAATGATGAAGTCAAAAGCCATCTTCAGAAATATAGGCTTCACACAAGGCGGCCCAGCCCAAGCCCACAAGCAGGTGGGACCCCTGGACCCCAGCTTGTAGTCTTAGGAGGAATATGGGTCCCATCGGAGTACACCACGACAGCCACCACTGCTCACACCGGCGCCGCCAATGCTCTGTTTAGCCCACACCTTGCCTCCCACGCGCAACTGCCGCACTACTGTACCACCACCCCTGTGCCCCAAGACTTCTATGCTGCCGTACCTCCGCAACCACAAAACCACAGCCTCCACCACCACAACCTCAACGTGTACAGGGAGATGTCGTCTAACACCCAAAGGTCACCGGAATATAAGGTTAGAGGAGGTGGAGAGCGGTCGGAGAGTATAGAGGATGTGAAGTCGGAGAGTATAGAGAGTGGTAAACCTGCTATAACCATGGTTTCTTGCCTCTTCAAAATCCTCCTAATGGTCGTGCGCCGACAAGGCAAGGATTACGATGAAGCCCCATTAGAGCCACTTTCTCCCAAAAACATCAGCAGGGGCCGACATTGCTTTGAAGGCAACAAGGATTTACTTTAA 1239 0.5085 METSRQELEALRGKQGTETAILEEFIPLKHPTAERCGMESILSDKANWMMSAQLWSQTSSEETKPQSSTMLSCKEAEIGLGLDSKQRSYGGGAFLPFSKQGVPELGLASSEKQTREEKKCTEPENDLKRESSGKGGGDDNGGEGSDQGKETSTVSSEAKRINSNSNSNTTSSTTQNHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVEGLTNDEVKSHLQKYRLHTRRPSPSPQAGGTPGPQLVVLGGIWVPSEYTTTATTAHTGAANALFSPHLASHAQLPHYCTTTPVPQDFYAAVPPQPQNHSLHHHNLNVYREMSSNTQRSPEYKVRGGGERSESIEDVKSESIESGKPAITMVSCLFKILLMVVRRQGKDYDEAPLEPLSPKNISRGRHCFEGNKDLL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2274 412 SUPERFAMILY Homeodomain-like 177 237 IPR009057 -
Bisa08g2274 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 176 236 IPR017930 -
Bisa08g2274 412 MobiDBLite consensus disorder prediction 108 183 - -
Bisa08g2274 412 FunFam Myb family transcription factor 178 236 - -
Bisa08g2274 412 Pfam Myb-like DNA-binding domain 181 232 IPR001005 -
Bisa08g2274 412 MobiDBLite consensus disorder prediction 327 354 - -
Bisa08g2274 412 Gene3D - 178 236 - -
Bisa08g2274 412 MobiDBLite consensus disorder prediction 110 136 - -
Bisa08g2274 412 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 357 IPR044787 GO:0003700|GO:0006355
Bisa08g2274 412 MobiDBLite consensus disorder prediction 146 179 - -
Bisa08g2274 412 MobiDBLite consensus disorder prediction 338 354 - -
Bisa08g2274 412 NCBIfam myb-like DNA-binding domain, SHAQKYF class 179 234 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2274 Bisa-ChrBisa08 54069371 54073164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2274 1 304 G2-like Transcription Factor Family AT2G03500 47.352 3.62e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa08g2274 Myb_DNA-binding 8.2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2274 08 54069371 54073164 Bisa02g0529 02 9199454 9201718 CCT
Bisa08g2274 08 54069371 54073164 Bisa08g2274 08 54069371 54073164 ECH