Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2269 ATGGATAAGAAAAAGGTGGCTGTTCCACTTGTATGTCACGGCCATTCTCGCCCAGTAGTGGATCTGTTTTACAGTCCTGTTACGCCAGATGGATATTTCCTCATCAGTGCCAGCAAGGATTCTAGTCCTATGCTCCGAAATGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGACACAAAGGTGCAGTATGGAGCTGCTGCTTGGATACTAATGCTTTGCGTGCTGCAACTGCATCGGCCGATTTTTCATTGAAAGTTTGGAATGCATTAACAGGTGATGAATTACACTCATTTGAACATAAGCACATTGTTCGAGCATGTGCTTTTTCTGAGGATACACACCTTTTGCTCACTGGGGGAGTAGAGAAAATTCTTCGAATTTATGATTTGAATCGTCCTGATGCACCACCCAGAGAAGTGGATCAGTCCCCTGGTTCTGTCAGAACGGTTGCATGGCTTCATAGTGATCAGACGATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTGTGGGATTTGAGAAGTGGTAAAATAGTCCAGACACTTGAGACCAAGGCATCAGTGACGAGTGCTGAAGTGAGTCAGGATGGTCGCTACATCACAACTGCTGATGGTTCTACTGTTAAGTTTTGGGATGCAAATCACTATGGGTTGGTGAAGAGCTACGACATGCCCTGCACTGTGGAATCAGCTTCATTGGAACCAAAATATGGGAATAAGTTCATTGCTGGGGGAGAAGACATGTGGGTTCATGTTTTTGATTTTCATACTGGCAATGAGATTGCATGCAACAAGGGTCACCATGGCCCTGTACATTGTGTTCGTTTCTCTCCTGTTGGAGAATCATTTGCTTCAGGATCCGAGGATGGAACAATCAGAATATGGCATACTGGCCCTTTGACCCAGGATGAATCAGAGGACTTATCTACAAATGGACCGATTTCAAAGGTGGAAGTAAAAGAGGTTTCACGCAAGATTGAGGGTGTTCATATTGCAGACAAGGAGAAATCCAAAGAAAAGGAGGAGGCAGTGGAGGAATGA 1047 0.446 MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGYFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSLKVWNALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDLNRPDAPPREVDQSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDLRSGKIVQTLETKASVTSAEVSQDGRYITTADGSTVKFWDANHYGLVKSYDMPCTVESASLEPKYGNKFIAGGEDMWVHVFDFHTGNEIACNKGHHGPVHCVRFSPVGESFASGSEDGTIRIWHTGPLTQDESEDLSTNGPISKVEVKEVSRKIEGVHIADKEKSKEKEEAVEE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2269 348 Gene3D - 9 320 IPR015943 GO:0005515
Bisa08g2269 348 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 297 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 92 130 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 134 174 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 177 214 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 50 89 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 217 256 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 259 298 IPR001680 GO:0005515
Bisa08g2269 348 SMART WD40_4 5 47 IPR001680 GO:0005515
Bisa08g2269 348 CDD WD40 54 299 - -
Bisa08g2269 348 SUPERFAMILY WD40 repeat-like 4 302 IPR036322 GO:0005515
Bisa08g2269 348 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Bisa08g2269 348 FunFam Serine-threonine kinase receptor-associated protein 8 323 - -
Bisa08g2269 348 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Bisa08g2269 348 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Bisa08g2269 348 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Bisa08g2269 348 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Bisa08g2269 348 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 7 339 - -
Bisa08g2269 348 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 297 - -
Bisa08g2269 348 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 132 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2269 Bisa-ChrBisa08 53973103 53976801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2269 9 298 Eukaryotic Initiation Factors Gene Family AT2G46290 29.688 1.21e-39 141