Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2255 ATGTCCACGGGGCAGTCGAATGGAGACCCTGAGTCTCTGCACCAGCCCTTGCTTCGTTCTGAAAGATCCGTCATCAACTCTACATCCCAAGTTGCCATCGTCGGCTCCAATGTCTGCCCCATTGAGAGCCTTGACTACGAGTCTCTGATTTTTGAGAACAAGTTCTGCACGCAGGATTGGAGAAGTCGAGGAAAGGTTCAGATATTTCAGTACATTTTTATGAAGTGGCTTTTCTGCTTTCTGATTGGTTTGATCGTTAGCCTCATCGGATTTTGCAATAATCTGGCGGTTGAGAATATCGCTGGCCTTAAGTTCGTCGTCACATCTAATATGATGTTGCAGAGGAGGTTTCTGTTGGCCTTTATAATTTTTTTCGCCTCTAATTTGGGTCTCACGCTTTTCGCTTCAATAATTACGGCTTTTATAGCACCTGCTGCCGCGGGTTCTGGTTTACCAGAGGTGAAGGCCTACCTAAACGGCGTAGACGCGCCGGGCATATATACTCTAAAAACTCTGTTGGTTAAGATTATTGGAAGTATTTCGGCAGTTTCATCATCCCTTCTTGTCGGAAAGGCAGGGCCCATGGTGCATACAGGTGCATGTGTGGCATCGTTGCTGGGTCAGGGTGGGTCAAAGAGATATGGATTAACATGGAAATGGCTGCGTTTTTTTAAGAATGATCGAGATCGGCGGGATCTAATAACATGTGGATCAGCAGCTGGAATTGCTGCTGCCTTCCGTGCCCCAGTTGGTGGGGTTTTGTTTGCTCTTGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTCTATGGAGAGCTTTCTTCACAACAGCAGTAGTTGCAATTGTGCTTCGTGCACTAATTGATGTTTGTTTAAGTGGTAAATGTGGGCTATTTGGTAAAGGTGGGCTGATAATGTTTGATGTTTATTCAGCAAGTATTTCATATCATCTGGAGGATGTGCCTCCTGTGTTCATTCTTGGAGTTATAGGGGGCATTCTTGGAAGCTTATATAATTCTCTGTTGAGAAAAGTTCTCCGTGTATACAATATTATCAATGAGAAAGGCATTGTGTACAAAATTTTGCTTGCTTGTTTAATCTCAATTTTTACCTCCTGTCTTCTTTTTGGATTGCCATGGCTTGCATCTTGCCAACGTTGTCCGCTTGATGCAGCTGAGGCTTGTCCTACGATCGGCCGCTCTGGTAACTACAAGAAATTCCAATGCCCTCCTGGCCATTACAATGATCTTGCCAGCCTCATTTTTAACACAAATGATGATGCTATCAGAAATCTATTTAGCAGGAACACAGATGAGGAGTTTCAGTATTCATCAATGTTCATCTTTTTCTTCACATGCTTTTTTCTAAGCATCTTTAGCTATGGAATTGTTGCCCCTGCTGGTCTTTTTGTGCCAGTTATTGTAACTGGTGCATCTTATGGACGATTTGTTGGGATGCTGGTTGGCAAAAATTCAACTCTTAACCATGGCCTTTTTGCTGTACTGGGTGCTGCTTCCTTTCTTGGTGGATCTATGAGGATGACAGTTTCCTTGTGCGTAATCATTCTAGAATTAACCAACAATTTGTTATTGCTACCCTTGATAATGCTGGTGCTTTTGGTATCTAAGACTGTAGCAGATGCTTTCAATGCAAATATTTATGACCTTATCATGAAAGCCAAGGGGTTTCCTTATTTAGAAACTCATGCTGAGCCATATATGAGGCAGCTAACAGTAGGCGATGTGGTTACAGGCCCACTTCAGCTCTTTAATGGCATTGAGAAGGTTAGTAACATTGTGTTTGTACTCAAAACTTCTAGGCACAATGGGTTCCCTGTAATCGATGAGCCTCCACATTCTGAAGCTCCAGTTTTATTCGGTGTAATCCTTCGTGACCATCTTCTCAAGTTGTTAAAGAAGAAAGCTTTCTTGTCCACACCGATGGCAATAGGAGATGATGCTTTCAATCAGTTTTCTTCAGATGACTTTGCTAAGAGGGGTTCAGGCAATAGTGAAAATATAGAGGAAATACAGTTAACTGAAGAAGAGATGGACATGTTCGTAGATCTACATCCATTTACTAATGCTTCACCATATACTGTCGTGGAGACAATGTCACTGGGAAAGGCCCTTACCCTTTTTCGAGAAGTTGGTTTAAGGCACCTTCTGGTGATACCTAAAATCCCTAGTAGGTCACCCGTTGTGGGTATTCTGACAAGGCACGACTTCATGCCGGAACACATACTGGGTTTGCATCCTATGCTGGCAAGAAGCAGGTTGAAAAGATTAAGAATCAAGTTACCCTGA 2304 0.4306 MSTGQSNGDPESLHQPLLRSERSVINSTSQVAIVGSNVCPIESLDYESLIFENKFCTQDWRSRGKVQIFQYIFMKWLFCFLIGLIVSLIGFCNNLAVENIAGLKFVVTSNMMLQRRFLLAFIIFFASNLGLTLFASIITAFIAPAAAGSGLPEVKAYLNGVDAPGIYTLKTLLVKIIGSISAVSSSLLVGKAGPMVHTGACVASLLGQGGSKRYGLTWKWLRFFKNDRDRRDLITCGSAAGIAAAFRAPVGGVLFALEEMASWWRSALLWRAFFTTAVVAIVLRALIDVCLSGKCGLFGKGGLIMFDVYSASISYHLEDVPPVFILGVIGGILGSLYNSLLRKVLRVYNIINEKGIVYKILLACLISIFTSCLLFGLPWLASCQRCPLDAAEACPTIGRSGNYKKFQCPPGHYNDLASLIFNTNDDAIRNLFSRNTDEEFQYSSMFIFFFTCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFVGMLVGKNSTLNHGLFAVLGAASFLGGSMRMTVSLCVIILELTNNLLLLPLIMLVLLVSKTVADAFNANIYDLIMKAKGFPYLETHAEPYMRQLTVGDVVTGPLQLFNGIEKVSNIVFVLKTSRHNGFPVIDEPPHSEAPVLFGVILRDHLLKLLKKKAFLSTPMAIGDDAFNQFSSDDFAKRGSGNSENIEEIQLTEEEMDMFVDLHPFTNASPYTVVETMSLGKALTLFREVGLRHLLVIPKIPSRSPVVGILTRHDFMPEHILGLHPMLARSRLKRLRIKLP 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2255 767 Pfam CBS domain 696 742 IPR000644 -
Bisa08g2255 767 Pfam Voltage gated chloride channel 132 546 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 19 749 - -
Bisa08g2255 767 ProSiteProfiles CBS domain profile. 692 753 IPR000644 -
Bisa08g2255 767 SMART cbs_1 696 747 IPR000644 -
Bisa08g2255 767 SMART cbs_1 585 638 IPR000644 -
Bisa08g2255 767 SUPERFAMILY CBS-domain pair 568 743 IPR046342 -
Bisa08g2255 767 FunFam Chloride channel ClC3 67 385 - -
Bisa08g2255 767 SUPERFAMILY Clc chloride channel 53 567 IPR014743 -
Bisa08g2255 767 Gene3D - 566 746 IPR046342 -
Bisa08g2255 767 PRINTS Chloride channel signature 514 533 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PRINTS Chloride channel signature 464 484 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PRINTS Chloride channel signature 496 512 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PRINTS Chloride channel signature 175 194 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PRINTS Chloride channel signature 552 566 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PRINTS Chloride channel signature 144 161 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 PRINTS Chloride channel signature 239 258 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa08g2255 767 Gene3D Clc chloride channel 67 565 - -
Bisa08g2255 767 CDD CBS_pair_voltage-gated_CLC_euk_bac 568 745 - -
Bisa08g2255 767 PRINTS Plant CLC chloride channel signature 292 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g2255 767 PRINTS Plant CLC chloride channel signature 260 268 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g2255 767 PRINTS Plant CLC chloride channel signature 416 432 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa08g2255 767 PRINTS Plant CLC chloride channel signature 274 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2255 Bisa-ChrBisa08 53708890 53719505 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2255 11 767 Ion Channels AT5G33280 77.939 0.0 1186