Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2242 ATGTCGTCCGAGATCGAGGTCGTTGAAGAGGTCCAATCGCGGGATCAGCAACCGACGGCCTCCGCCGGAGGACTCGGCGGCGGTGAATTGGGGAAGGAGAGTTTGCGGAATGATGTTTACTCGGCAGCGGCTTATGGGGATTTGGAGAAGCTGCATAGATTGGTGGAGCAGGAAGGTTGCTCCGTTTCCGAGCCCGATGGGCTCGGATACTATGCCCTACAGTGGGCTGCACTTAACAATTGTACTGCCGCTGCTCAGTTTATCATTGAGCATGGGGGAGATGTGAATGCAACAGATCATACTGGACAGACAGCATTACATTGGAGTGCGGTTCGGGGTGCCATCCAGGTTGCAGAGCTTTTGCTCCAAGAAGGTGCCCGAGTTAGTACTGCTAATATGTATGGGTATCAGACAACGCATGTTGCAGCTCAACATGGTCAGACAGCCTTCCTCTACCACATCGTTTCAAAATGGAATGCTGACCCTGATGTTCCTGATAATGATGGAAGAAGCCCCTTGCATTGGGCTGCTTACAAAGGTTTTGCTGATTGTGTTCGTCTTCTGCTATTCCTAGATGCATATAGGGGGCGTCAGGACAATGAGGGTTGTACTCCTCTTCATTGGGCTGCTATTAGGGGTAATTTGGAAGCATGTACTGTGTTAGTACGGGCTGGCAAGAAGGAAGACCTGATGGTGACTGAAAATAGTGGCCTTACACCAGCACAGCTTGCTTCTGACAAGAATCATAAACAAGTTGCTTTTTTCCTTGGTAATGCCAGAAGGTTACTTGACAGACGCTGTGATGGGAATAGCAGCCTTGGAAAAATTTCCAAATTAGGACTTGCTCCTGTCCTTTGGTTTATGATTTTTCTGCTCATGATCACCTACATTCACACGGTCATCTTGGCAACAAATCTGCCAAGGCTAACAGCTGCCTCTGGGCTTCTTGCATGGTTTGGAGTTTTCTTAGCAACTGCTGGACTGGTTATGTTTTACAGATGTAGCAGCAAGGATCCTGGTTTCCTCAGAATGAATGTGCATGACTCTGAGAATATTAAAGATGATGAACCTTTCTTAAAAATTGAGATAAATCATCCTGCCTTGCTAGCTGGAAATTGGTCCCAGCTTTGTGCAACATGCAAGATTGTCAGGCCTCTTCGTGCAAAGCACTGTTCTACCTGTAATCATTGTGTGGAACAATTTGATCATCATTGTCCGTGGGTATCCAATTGCATTGGCAAGAAGAACAAATGGGATTTCTTTGTCTTTCTTGTTCTCGAAGTTTCAGCTATGTTGATAACTGGTGGAGTTACTCTAACAAGACTATTAACTGATCCACTTGCTCCTTCTTCATTTGGAGCATGGATTCAACATGCTGGTACAAATCATGTGGGGGCCATGTCATTTCTAATTGTTGATATTTTCCTCTTCTTTAATGCGTTCTTTTTGACAGTTGTTCAAGCTAATCAGATATCACGTAATATTACGACAAATGAAATGGCAAATTCAATGAGATATAGCTATCTTAGAGGTGCGGCTGGAAGATTCAGAAATCCATACGATCAAGGAATCAAGAAAAACTGTACAGATTTCTTGATCAATGGATACAATGAAGATGTGGAGTGTATTGAAGAACCAGGTAATTCTGGGGGTATAATGATGAACATTGCAAGGATCTCAAGCTTAGTAAATGGAGACTCGCATTCTCATAGTGCAAAGGGCAATGGACATGTTATTAATGTCAGTTCCACAAGCTCCAACTCTAGTACACGTCATGCTAATGGTAATGGTCACGTTCATTCCTCGCATTGTAGCCATAATAATAGCCATGGCAAAACAAAAAATGAGAGTATTCCTTTGGGTTTAGGTCTTGGTCTTGGTCGGAACACCAAATCTGGTGCATCATCATCATGA 1914 0.4415 MSSEIEVVEEVQSRDQQPTASAGGLGGGELGKESLRNDVYSAAAYGDLEKLHRLVEQEGCSVSEPDGLGYYALQWAALNNCTAAAQFIIEHGGDVNATDHTGQTALHWSAVRGAIQVAELLLQEGARVSTANMYGYQTTHVAAQHGQTAFLYHIVSKWNADPDVPDNDGRSPLHWAAYKGFADCVRLLLFLDAYRGRQDNEGCTPLHWAAIRGNLEACTVLVRAGKKEDLMVTENSGLTPAQLASDKNHKQVAFFLGNARRLLDRRCDGNSSLGKISKLGLAPVLWFMIFLLMITYIHTVILATNLPRLTAASGLLAWFGVFLATAGLVMFYRCSSKDPGFLRMNVHDSENIKDDEPFLKIEINHPALLAGNWSQLCATCKIVRPLRAKHCSTCNHCVEQFDHHCPWVSNCIGKKNKWDFFVFLVLEVSAMLITGGVTLTRLLTDPLAPSSFGAWIQHAGTNHVGAMSFLIVDIFLFFNAFFLTVVQANQISRNITTNEMANSMRYSYLRGAAGRFRNPYDQGIKKNCTDFLINGYNEDVECIEEPGNSGGIMMNIARISSLVNGDSHSHSAKGNGHVINVSSTSSNSSTRHANGNGHVHSSHCSHNNSHGKTKNESIPLGLGLGLGRNTKSGASSS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2242 637 Gene3D - 33 140 IPR036770 -
Bisa08g2242 637 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 32 541 - -
Bisa08g2242 637 Pfam DHHC palmitoyltransferase 375 502 IPR001594 GO:0016409
Bisa08g2242 637 SMART ANK_2a 68 97 IPR002110 GO:0005515
Bisa08g2242 637 SMART ANK_2a 101 130 IPR002110 GO:0005515
Bisa08g2242 637 SMART ANK_2a 236 265 IPR002110 GO:0005515
Bisa08g2242 637 SMART ANK_2a 201 232 IPR002110 GO:0005515
Bisa08g2242 637 SMART ANK_2a 168 200 IPR002110 GO:0005515
Bisa08g2242 637 SMART ANK_2a 34 64 IPR002110 GO:0005515
Bisa08g2242 637 Gene3D - 206 259 IPR036770 -
Bisa08g2242 637 SUPERFAMILY Ankyrin repeat 39 257 IPR036770 -
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat profile. 201 233 IPR002110 GO:0005515
Bisa08g2242 637 MobiDBLite consensus disorder prediction 1 29 - -
Bisa08g2242 637 Pfam Ankyrin repeats (3 copies) 140 225 IPR002110 GO:0005515
Bisa08g2242 637 Pfam Ankyrin repeats (3 copies) 41 130 IPR002110 GO:0005515
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat profile. 168 200 IPR002110 GO:0005515
Bisa08g2242 637 Gene3D - 141 205 IPR036770 -
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat region circular profile. 201 225 - -
Bisa08g2242 637 ProSiteProfiles DHHC domain profile. 375 425 - -
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat profile. 68 100 IPR002110 GO:0005515
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat region circular profile. 168 189 - -
Bisa08g2242 637 MobiDBLite consensus disorder prediction 565 637 - -
Bisa08g2242 637 MobiDBLite consensus disorder prediction 565 615 - -
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat region circular profile. 101 132 - -
Bisa08g2242 637 ProSiteProfiles Ankyrin repeat profile. 101 133 IPR002110 GO:0005515
Bisa08g2242 637 FunFam S-acyltransferase 155 263 - -
Bisa08g2242 637 FunFam S-acyltransferase 28 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2242 Bisa-ChrBisa08 53360440 53376767 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2242 31 221 Ion Channels AT2G25600 32.292 2.67e-12 68.2