Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2219 ATGGAGGACAGAGTAGTCAACACGATCGCTGTGATATCAGTGATCGTCCTTGTCGCTTTCCTTGGCATCGCTCGCGTCTTCCTCAAGCGCTCACGAGCCTTCTTCCTCATCGTCGGCGCCGACGTCGCTGTTGTTCTCGCAGTCTTCGCCTGCGTCCTGATTAGAAGACGCTACAACAACCGAAGAAGAGTTGTAGAATCTCAACTGAGATCGGAAGGCAAAGAGCTCCGAATAGAGTACAGCTTCTTGCGAAAGGTCGCCGGAGTTCCGACGAAGTTTCGATTGAAGGAGCTCGAAGAAGCCACCGATGGTTTCCGATCGCTCCTCGGCCAAGGATCCTCGGCCTCTGTTTTCAAAGGCATTCTAAGCGACGGCACTTCGGTCGCCGTCAAGCGAATCAACGGCGAGGAGCGAGGCGAGAAGGAGTTCCGATCCGAAGTCGCCGCCATAGCCAGCGTTCAGCACGTGAACCTCGTGCGCCTGATCGGATACTGCAATGCCCCGACCGCCCCTAGGTATTTGGTCTACGACTTCATTCCCAACGGATCTCTTGATTCCTGGATTTTTCCCGCCAAGAGAGCTCCAAATCGAAGATACCGCGGCGGGTGCTTGTCCTGGAATTTGAGGTACAGAGTAGCAATTGACGTAGCCCGAGTTCTCTCCTACCTTCACAACGATTGCCGATCGAGAATCTTGCATCTCGATGTGAAACCAGAGAACATTCTGCTAGACGAGAATTTCAAAGCACTGGTGTCAGATTTCGGGCTCTCGAAGCTAATGGGGAGAGACGAGAGCCAAGTGATGACGACGGTGAGAGGAACCAGAGGGTATTTAGCCCCGGAGTGGCTGTTAGAACATGGGATATCAGAGAAATCAGATACTTACAGTTTTGGAATGGTTTTATTAGAAATAGTCGGAGGAAGGAGAAACGTGAGACTAGTAGAGAATCCGAACGATAGGTCGAAGAAGAAGTGGGAGTATTTTCCCAAGATAGTGAAGGAGAAAGTGAAGGAAGGGAAATTGATGGAGATAGTGGATGAGAGGCTGGTGGAGAGTGGGAATGTGGAAGAAAGGGAGGTGAGGAGGCTGGTTTATGTGGCACTTTGGTGCATTCAAGAGAGGCCAAGGGTGAGGCCAAGCATGGGGCAAGTGGTGGAGATGCTTGAAGGGAGGGTGAGGGTGGATGAGCCACCTGAGACGAGGATGATTCTGGTTGATCTGATTCCTTTGGATGGAGAAGACGAAGAAGGTAGTGAGAGTGTGAGGAGGTTGAGAGATTTCTGTGCTGGCGCACACAGAGACCTCAGCAATTTGGATTGTTTATCCACATACTCATTGGCAACCACAGTTCTATCCGGCAGATAG 1365 0.5128 MEDRVVNTIAVISVIVLVAFLGIARVFLKRSRAFFLIVGADVAVVLAVFACVLIRRRYNNRRRVVESQLRSEGKELRIEYSFLRKVAGVPTKFRLKELEEATDGFRSLLGQGSSASVFKGILSDGTSVAVKRINGEERGEKEFRSEVAAIASVQHVNLVRLIGYCNAPTAPRYLVYDFIPNGSLDSWIFPAKRAPNRRYRGGCLSWNLRYRVAIDVARVLSYLHNDCRSRILHLDVKPENILLDENFKALVSDFGLSKLMGRDESQVMTTVRGTRGYLAPEWLLEHGISEKSDTYSFGMVLLEIVGGRRNVRLVENPNDRSKKKWEYFPKIVKEKVKEGKLMEIVDERLVESGNVEEREVRRLVYVALWCIQERPRVRPSMGQVVEMLEGRVRVDEPPETRMILVDLIPLDGEDEEGSESVRRLRDFCAGAHRDLSNLDCLSTYSLATTVLSGR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2219 454 FunFam Putative receptor-like protein kinase 179 396 - -
Bisa08g2219 454 Gene3D Transferase(Phosphotransferase) domain 1 179 400 - -
Bisa08g2219 454 FunFam Putative receptor-like protein kinase 70 178 - -
Bisa08g2219 454 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Bisa08g2219 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Bisa08g2219 454 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Bisa08g2219 454 SMART serkin_6 103 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2219 454 PANTHER OS07G0415500 PROTEIN 33 400 - -
Bisa08g2219 454 SUPERFAMILY Protein kinase-like (PK-like) 86 389 IPR011009 -
Bisa08g2219 454 ProSiteProfiles Protein kinase domain profile. 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2219 454 Pfam Protein kinase domain 108 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2219 Bisa-ChrBisa08 52813931 52815295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2219 1 400 Receptor kinase-like Gene Family AT5G20050 65.423 1.28e-178 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa08g2219 Pkinase 5.1e-42 CL0016