Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2194 ATGGGGTGCTCATTTTCTGGCTTGAATGCACTATACGACAGCGCAAACGGGGGAGATGTTTGGATCAACGAGAACCGATTCCGCATCGTGAGGCAGCTCGGGGAAGGTGGGTTTTCCTACGTCTACTTGGTCAAGGAGTTGCCCAACGACTCTCAGGCCTCGGCGAGCAGTGGTCTCTCTAAGAAGCTCAAGGATCCCTCCCATATCTCAGATGATGGAACTTATGCTATGAAAAAGGTCCTTATTCAGAACAACGAACAATTGCAGTTGATTAAGGAGGAGATCCGTGTTTCATCGCTTTTTAGTCATCCAAATCTGCTTCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCTACTAAAGAAACATCATGGACCAATGAAGCATACTTGTTATTCCCTGTTCATTTGGATGGGACATTGCTAGACATTGCCCAAACTATGAAGGCCAAGAAGGAGTTCTTACCTACGTTAGATGTGCTTCAAATATTTCGGCAGCTTGTTGCAGGACTCAAGCACATGCACAGTCTGGATCCTCCGTATGCACATAATGATGTCAAACCTGGTAATGTTGTCATAACACACAGAAAAGGACTACCACCTGTTGCCATACTGATGGATTTTGGTAGTGCTCGACCCGGGAGGAGGCAAATTCGTTCTCGAGAAGAGGCACTCGAGTTGCAGGAATGGGCATCTGAGCATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGGCAAGTTGACATAGATGAGAGGACTGATGTTTGGTCACTAGGGTGCACGCTTTATGCAATAATGTATGGAGTGTCTCCATTTGAATATGCCCTTGGAGAATCTGGAGGAAGCCTGCAACTGGCCATAGTAAATGCTCAGATCAAATGGCCGGCTGGACCCAAGTCTCCATATCCCGAAGCTCTTCATCAATTTGTGACATGGATGCTTCAACCTCAGGCTGCTGTGCGACCCAGGATAGACGATATCGCTATTCATGTTGACAAGTTGGTTACCAAGTTCTCTTCTTGA 1035 0.4686 MGCSFSGLNALYDSANGGDVWINENRFRIVRQLGEGGFSYVYLVKELPNDSQASASSGLSKKLKDPSHISDDGTYAMKKVLIQNNEQLQLIKEEIRVSSLFSHPNLLPLLDHAIISVKPTKETSWTNEAYLLFPVHLDGTLLDIAQTMKAKKEFLPTLDVLQIFRQLVAGLKHMHSLDPPYAHNDVKPGNVVITHRKGLPPVAILMDFGSARPGRRQIRSREEALELQEWASEHCSAPFRAPELWDCPRQVDIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQIKWPAGPKSPYPEALHQFVTWMLQPQAAVRPRIDDIAIHVDKLVTKFSS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2194 344 Gene3D Transferase(Phosphotransferase) domain 1 13 343 - -
Bisa08g2194 344 Pfam Protein kinase domain 68 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2194 344 ProSiteProfiles Protein kinase domain profile. 27 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2194 344 SMART serkin_6 27 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2194 344 CDD STKc_16 26 338 - -
Bisa08g2194 344 SUPERFAMILY Protein kinase-like (PK-like) 19 334 IPR011009 -
Bisa08g2194 344 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 342 - -
Bisa08g2194 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2194 Bisa-ChrBisa08 52047265 52057454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2194 32 297 EF-hand Containing Proteins AT4G04710 26.217 4.36e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Bisa08g2194 Pkinase 2.6e-27 CL0016