Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2191 ATGGGAATTTGGTTCTGCTCACTCGCGATGGCTCTGTTTCATGGTAGAGCTTTGATTTTTCGAGGACACATGGTTACCGGGCATGAATCTAACCCAAACCTGATCCTTGGTGTCGTGATAACATCCCTGGTCTTCATTATGGCGCAAGATAGTACTTCCGCTGCTGAATCGGCACGAAGACGTTCTGGGCTGTTGCGAGATCAGGTTCAGCTGGTAAAGAGAAAGAATTCTGATCGCTATGAAATTGTCCCGATTCCAGATCCTTTGTCATTGGAGAAAGGTTTCTTCATAGTTATTCGAGCATGCCAATTTCTGGCTCAAAAGAATGATGGGATAATATTAGTAGGAGTAGCGGGTCCCTCTGGAGCAGGGAAGACTGTTTTCACCGAGAAGGTGCTCAACTTCATGCCGAGCGTGGCTGTCTTAACAATGGACAACTATAATGATTCTAGTCGAATTATAGATGGCAACTTTGATGACCCTCGGTTGACGGATTATGATACCTTGCTCGAAAATGTACAGGGTCTTAAAGCAGGGAAATCAATTCAGGTTCCAATATATGATTTCAAGTCTAGCTCTCGCATAGGTTACAGGACTGTCGAAGTCCCAAGCTCCCGTATTGTCATCATAGAAGGCATCTATGCCTTAAGTGAAAGACTACGACCTTTGCTTGATCTTCGTGTGTCTATCACTGGTGGAGTTCACTTTGATCTTGTTAAGCGGGTTTTGCGGGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAGGCTTTTATTGAGCCAGATCTCCAAACGGCACATATAAAAATCATCAACAAGTTTAATCCATTCTCTGGGTTCCAGAATCCCACCTATATATTGAAGTCAACAAGAGCTGTAACAGTTGATCAAATTAAGGCTGTTCTTGCTGCTGAATATACTGAAACCACAGAGGAAACTTATGACATTTATCTATTACCACCTGGGGAAGATCCTGAAGCATGTCAATCATATTTGAGGATGAGAAACCGGGATGGAAAATACAATCTCATGTTTGAGGAATGGGTTACAGACAGTCCATTCATAATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGAGGGCTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAGCAGCCACATCTTTTGTGATGATAAAGTTTGTGTAAAAACCGATTGGTTAGAACAACTTAATCGCCTATATGTTCAGGTGCAAGGGAAAGATAGAAACTATGTTGAATATATAGGAGAGAAACTGGGGTTGGATGGTTCATATGTTCCTCGCACTTACATTGAACAAATTCAACTAGAAAAGCTTGTGAATGATGTCGTGGCACTGCCAGATGACCTGAAAACAAAACTCAGCATAGATGATAATTTAGTTTCAAGTCCCAAAGAAGCCCTTTCCAGAGCTTCTGCCGATAGGAGAATGAAGCATCTTAACCGTAGTGTTTCACAATCTTACTCGAATCAAAGGGAAAAGACTCTATCTAAGTTGACTAGACTAGCTATAAATAACAGAAGGTTTGATGGGCGAGCTCTAGAATCACCTGCAGCGGCTACAAACCAAGGAGTCATTACTCAACTTTCTGAACAAATTTCCACTTTAAATGAGAGAATGGATGAGTTCACTTCCCGCATTGAAGAGCTTAATTCAAAGTTTGCAGTTAGAAAAGATTCAGCCAGTCAACAAAACTTGGCTTTACAGGCTGAAGCCTGCAATGGCTCTGGGCCCACTTCTCTCTTTGTGACAGGTTTGGGCAATGGGACATTGACTGGGTCACTGCTGCCTAAATCTTCATCATCGTCGCAACTGCCGAGGGAGAGCCCCCTGATGGAAGAGGTTTTACTTGTTGCACGAGGACAACGTCAAATCATGCATCAGTTAGATACTCTGAGCAACCTTGTGCATGAATATTGTGGACAGAGGTCATTCCCTGGAAGAGCAGAACAGACAAGCAGAACACGTGAGGTTGACTTCATTAACATTCCACTGATTATGACTTTGGCAATTGGTGTCGCAGGTGTCTTCTTGTTCAAGAATTTCACGACCCAAAAATGA 2124 0.4261 MGIWFCSLAMALFHGRALIFRGHMVTGHESNPNLILGVVITSLVFIMAQDSTSAAESARRRSGLLRDQVQLVKRKNSDRYEIVPIPDPLSLEKGFFIVIRACQFLAQKNDGIILVGVAGPSGAGKTVFTEKVLNFMPSVAVLTMDNYNDSSRIIDGNFDDPRLTDYDTLLENVQGLKAGKSIQVPIYDFKSSSRIGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSITGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSTRAVTVDQIKAVLAAEYTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHIFCDDKVCVKTDWLEQLNRLYVQVQGKDRNYVEYIGEKLGLDGSYVPRTYIEQIQLEKLVNDVVALPDDLKTKLSIDDNLVSSPKEALSRASADRRMKHLNRSVSQSYSNQREKTLSKLTRLAINNRRFDGRALESPAAATNQGVITQLSEQISTLNERMDEFTSRIEELNSKFAVRKDSASQQNLALQAEACNGSGPTSLFVTGLGNGTLTGSLLPKSSSSSQLPRESPLMEEVLLVARGQRQIMHQLDTLSNLVHEYCGQRSFPGRAEQTSRTREVDFINIPLIMTLAIGVAGVFLFKNFTTQK 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2191 707 Coils Coil 547 574 - -
Bisa08g2191 707 SUPERFAMILY CYTH-like phosphatases 307 454 IPR033469 -
Bisa08g2191 707 CDD UMPK_like 114 286 - -
Bisa08g2191 707 ProSiteProfiles CYTH domain profile. 295 457 IPR023577 -
Bisa08g2191 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 283 IPR027417 -
Bisa08g2191 707 Gene3D - 113 293 IPR027417 -
Bisa08g2191 707 PRINTS Uridine kinase signature 112 129 - -
Bisa08g2191 707 PRINTS Uridine kinase signature 235 245 - -
Bisa08g2191 707 PRINTS Uridine kinase signature 271 284 - -
Bisa08g2191 707 PRINTS Uridine kinase signature 179 194 - -
Bisa08g2191 707 Pfam CYTH domain 319 451 IPR023577 -
Bisa08g2191 707 Gene3D - 301 460 - -
Bisa08g2191 707 PANTHER URIDINE KINASE 79 469 - -
Bisa08g2191 707 Pfam Phosphoribulokinase / Uridine kinase family 115 283 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2191 Bisa-ChrBisa08 51987567 51997106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2191 114 283 PRT Gene Family AT5G40870 27.374 2.77e-17 83.6