Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2178 ATGGCTGGTCGTCGAAGGAGGAGGCAACACTTCAGCAAGATCCATGCGTTTACGTGCGGGAAATCGTCGTTTAAGGAGGAGCATTCTTTGATCGGAGGCCCTGGGTTCTCGAGGATAGTGTATTTCAACGAGGCGCAACGCGTGGACGACGAATTTCGGTATTGCAACAATTACGTGAGGACCACGAAATACACTCTGGCTTCGTTCCTTCCGAAATCGCTGTTCGAGCAGTTTCGGAGAGTCGCGAATTTCTATTTCCTCGTATGTGCTGTTCTGTCGTTTTTCCCTGTCTCTCCTTACTCTGCTGTCAGCAATGTCGTCCCTCTCGTCGTTGTTGTTGCTGCTACCATGATGAAGGAGGTGCACGAAGATTTGAGGCGCAAACAGCAGGATATTGAGATGAATAACAGAGAGGTCAAAGTGCATCGCGGAGAGGGTGTGTTTGAGCCTTCAAAATGGAGGGACCTAAAAGTTGGGAGCATAGTGAAGGTGGAAAAAGACGAGTTTTTTCCTGCAGATCTCATCCTACTTGCATCAAACTATGACGATGGGGTTTGTTATGTTGAGACCATGAATCTCGATGGAGAAACAAATCTAAAATTAAAGCAGGCACTAGAAGAAACTTCCAAGTTGCATGAAGATTCAGACTTGAAGGATCTAAAGGGGACCATCAAATGTGAGGACCCAAATGCAAATTTATACGCTTTCGTGGGCGCCATAGAGCTTCATGGTGAACAGCACGCTCTTGCGCCTCAGCAAATTCTTCTCAGAGACTCAAAGCTTAGGAACACCGATTTCATCTACGGCGTTGTCGTTTTCACAGGGCACGACACGAAGGTTATGCAGAACGCAACAGAGCCTCCTTCAAAGAGAAGCAGAGTGGAGAAACGCATGGATAAGATCATCTACTTTCTGTTCTTCATCTTGGTCATGATGTCTTTTGTGGGGTCCATTGCTTTTGGGATTACAACAAAGGAAGACATTGAAGATGGAAGAGTGAAAAGATGGTATCTCAGACCAGAGAGTACCACAGTTTACTATGATCCAAATCGAGCACCACTTGCAGCGGTTCTGCACTTTTTGACTGCTGTTATGTTGTATGGTTACTTGATTCCAATTTCGTTGTACGTGTCAATCGAAGTTGTGAAGGTTCTTCAGAGCATTTTTATCAACCAAGATGTGAACATGTACCATGAAGAAACTGACAAGCCAGCACATGCTCGAACCTCGAATTTGAATGAAGAACTGGGGCAAGTTGATACTATACTTAGTGACAAAACAGGGACTTTAACATGCAATTCCATGGAGTTTATAAAGTGTTCCATTGCTGGGGTTGCTTATGGACGTGGTGTTACAGAAGTGGAGAGAGCTCTCGCCAAGCGAAAAGGAGTGCTTTTGAATGAAAATCCAACAGAAAGTGAAGGCAAGTTATCCATCAAAGGCTTTAACTTCACGGATGAGAGGATTATGAATGGGAATTGGATCCATCAGCCTCAAGCACATGAAATCCAGAGGTTTTTAAGATTGCTGGCTGTGTGCCATACTGCAGTGCCTGAGGTTGATGAAGAATCAGGGAAGGTTTTGTATGAAGCTGAATCACCAGATGAAGCAGCTTTTGTGATTGCAGCAAGAGAACTGGGGTTTGAGTTTTATGAAAGGACACCACAAGCCATTGTCATCCGCGAGTTTAACCCCAAAGCAAACATGAAGGAGGAAAGATCCTACAAACTTCTACACGTCTTAGAATTTAACAGTGCAAGAAAGAGGATGTCTGTCATTGTTAGAGATGCGGATGGGAAACTTCTGCTACTTTCCAAAGGTGCTGACAGTGTTATATTTGAAAGACTTGCGAAAGATGGGAGGGAGTATGAGGAGAAGACGAGGGAGCACATTCTTGAGTATGGTGATGCTGGTCTGAGGACTTTGTTACTGGCATATCGCACGCTTGACGAGGAAGAATATAGTCAGTTTAACAAGGAATTCACAGAGGCCAAGAACAGAGTTAGTGCAGATCGGGATGAGATTATTGAGAAAGTAGTGGAAAAGATTGAGAAGGATTTGATTCTTCTGGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGAATGCATCGACAAGCTAGCACAGGCTGGGATTAAACTGTGGGTTTTGACTGGTGATAAGATGGAGACAGCAATTAATATTGGATTTGCTTGCAGTTTACTAAGACAAGGAATGACGCAAGTTATAATTAGTTCCGACACTCCAGAAGCTAAAGCGCTGGAGAACAATGAGGACAAGAAGGCCGCTGCTAAGGCACTTAAGGCAAGTGTTTTGAATCAGATAAAGGAGGGAAAGGCATTGCTTTCTAAAGCAGAAAATAATTCCGAGGCCTTAGCTCTGATCATCGATGGGAAGAGCCTTGTTTATGCATTGCATGATGATGTGCAGGACTTGTTTCTTGATCTTGCCATTGGCTGTGCGTCTGTTATATGCTGTCGCTCATCTCCCAAACAGAAAGCACTTGTTACAAGATTGGTCAAGACTAAAACAGGGAGTACAACTCTAGGAATCGGTGATGGAGCAAACGATGTTGGAATGCTCCAAGAAGCAGACATTGGAATTGGCATCAGTGGCGTTGAAGGAATGCAGGCAGTTATGTCAAGTGACATTGCGATTGCCCAGTTTCGGTATCTAGAACGCCTTCTTCTTGTGCATGGACATTGGTGTTACAGAAGAATATCAAAAATGATCTGCTACTTCTTTTACAAGAACGTTGTCTTCGGCTTCACTCTCTTCTTCTATGAGATGTATGCGTCATTCTCAGGGCAAACAGTCTACAACGATTGGTTCTTGTCCCTATTCAATGTTGTCTTCACTTCACTTCCTGTGATTGCCTTAGGAGTGTTTGACAAGGATATCTCTGCTAAGTTATGCCTCAAGTTCCCACTATTATACCAAGAAGGCGTCCAAAATCTGCTATTTTCCTGGAGACGAATATTAGGCTGGATATTCAACGGGGTGCTAACTGCTGCCATCATCTTCTTCTTCTGCATCAAAGCCATGGAGCACCAAGCCTTCCGAAAAGGTGGTGAAGTGGCCGGCCTTGGCGTGCTCGGCGCCGCCATGTACACCTGTGTCGTGTGGGTGGTGAACTGCCAAATGGCACTATCCATCAGCTACTTCACATACATACAACACATATTCATATGGGGTAGCATTATGTTTTGGTACATATTCCTCATGGTCTATGGAGCTCTAGACCCTACACTCTCAGCCAATGCCTATAAACTCTTCATTGAAGCTTGTGCTCCTTCTCCATCTTACTGGTTCGTCACATTGCTCGTGCTTCTGTCCTCTCTCATTCCATACTTCGTCTTTGCCTCCTTTCAGATGAGGTTCTTCCCTATGTTCCATCAGATGATTCAGTGGATCAAGAATGATGGGCAGAGTAATGATCCAGAGTTCTGTAATGTGGTGAGGCAGAGATCAATACGACATACTACGGTGGGGTATACGGCGCGTTTTGAGGCATCCAAGAAATTTTAA 3537 0.4444 MAGRRRRRQHFSKIHAFTCGKSSFKEEHSLIGGPGFSRIVYFNEAQRVDDEFRYCNNYVRTTKYTLASFLPKSLFEQFRRVANFYFLVCAVLSFFPVSPYSAVSNVVPLVVVVAATMMKEVHEDLRRKQQDIEMNNREVKVHRGEGVFEPSKWRDLKVGSIVKVEKDEFFPADLILLASNYDDGVCYVETMNLDGETNLKLKQALEETSKLHEDSDLKDLKGTIKCEDPNANLYAFVGAIELHGEQHALAPQQILLRDSKLRNTDFIYGVVVFTGHDTKVMQNATEPPSKRSRVEKRMDKIIYFLFFILVMMSFVGSIAFGITTKEDIEDGRVKRWYLRPESTTVYYDPNRAPLAAVLHFLTAVMLYGYLIPISLYVSIEVVKVLQSIFINQDVNMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVERALAKRKGVLLNENPTESEGKLSIKGFNFTDERIMNGNWIHQPQAHEIQRFLRLLAVCHTAVPEVDEESGKVLYEAESPDEAAFVIAARELGFEFYERTPQAIVIREFNPKANMKEERSYKLLHVLEFNSARKRMSVIVRDADGKLLLLSKGADSVIFERLAKDGREYEEKTREHILEYGDAGLRTLLLAYRTLDEEEYSQFNKEFTEAKNRVSADRDEIIEKVVEKIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMTQVIISSDTPEAKALENNEDKKAAAKALKASVLNQIKEGKALLSKAENNSEALALIIDGKSLVYALHDDVQDLFLDLAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLGIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISKMICYFFYKNVVFGFTLFFYEMYASFSGQTVYNDWFLSLFNVVFTSLPVIALGVFDKDISAKLCLKFPLLYQEGVQNLLFSWRRILGWIFNGVLTAAIIFFFCIKAMEHQAFRKGGEVAGLGVLGAAMYTCVVWVVNCQMALSISYFTYIQHIFIWGSIMFWYIFLMVYGALDPTLSANAYKLFIEACAPSPSYWFVTLLVLLSSLIPYFVFASFQMRFFPMFHQMIQWIKNDGQSNDPEFCNVVRQRSIRHTTVGYTARFEASKKF 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2178 1178 CDD P-type_ATPase_APLT_Dnf-like 56 1014 - -
Bisa08g2178 1178 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 692 IPR023299 GO:0000166
Bisa08g2178 1178 Gene3D - 689 894 IPR023214 -
Bisa08g2178 1178 FunFam Phospholipid-transporting ATPase 690 894 - -
Bisa08g2178 1178 NCBIfam phospholipid-translocating P-type ATPase 54 1139 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Bisa08g2178 1178 Pfam haloacid dehalogenase-like hydrolase 635 772 - -
Bisa08g2178 1178 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Bisa08g2178 1178 Pfam Cation transport ATPase (P-type) 512 616 - -
Bisa08g2178 1178 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1132 IPR023298 -
Bisa08g2178 1178 FunFam Phospholipid-transporting ATPase 532 690 - -
Bisa08g2178 1178 Pfam Phospholipid-translocating P-type ATPase C-terminal 882 1132 IPR032630 -
Bisa08g2178 1178 NCBIfam HAD-IC family P-type ATPase 820 937 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa08g2178 1178 NCBIfam HAD-IC family P-type ATPase 359 493 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bisa08g2178 1178 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Bisa08g2178 1178 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Bisa08g2178 1178 PRINTS P-type cation-transporting ATPase superfamily signature 854 873 - -
Bisa08g2178 1178 SUPERFAMILY HAD-like 418 909 IPR036412 -
Bisa08g2178 1178 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 1143 - -
Bisa08g2178 1178 SFLD C1.7: P-type atpase like 405 905 - -
Bisa08g2178 1178 Gene3D - 528 688 IPR023299 GO:0000166
Bisa08g2178 1178 Coils Coil 118 138 - -
Bisa08g2178 1178 Pfam Phospholipid-translocating ATPase N-terminal 40 104 IPR032631 -
Bisa08g2178 1178 SFLD p-type atpase 405 905 IPR044492 -
Bisa08g2178 1178 Gene3D - 109 286 - -
Bisa08g2178 1178 FunFam Phospholipid-transporting ATPase 115 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2178 Bisa-ChrBisa08 51808655 51817069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2178 10 1175 Primary Pumps ATPases AT3G25610 69.650 0.0 1743