Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2168 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTCGAGATCTGTGAGAGAGTTTATGTTTTCGATTGCTGCTTCACGACGGATGCTTGGAATGAAGAAAATTACAAAGTCTATATGGACGGGATTGTTGGTCAACTTCGGGAGCATTTGCCTGATGCTTCGGTCTTGGTCTTCAATTTTCGTGAGGAAGGAACAAAGAGCCAGATGGCTAACATCTTGTCTGAGTATGATATTACTATTATGGATTACCCTCGGCAATATGAGGGCTGCCCTGTGCTAAAAATGGAGGTCATCCACCACTTTTTAAGGTCAGGGGAAAGTTGGCTCTCACTTGGGCAGCATAATGTGTTGTTGATGCATTGTGAACGTGGTGGTTGGCCGGTATTAGCTTTCATGCTGGCCGCGCTCTTGATTTATAGGAAACAATACAGTGGAGAACAAAGGACTTTAGACATGGTTTACAGGCAGGCACCACGTGAGCTTTTGCATTTGTTGACACCATTGAATCCAATCCCTTCCCAAGTGCGTTATTTGCAGTATATTTCAAGGAGAAATGTGGCCATAGATTGGCCTCCGTTGGACAGGGCACTCAAGTTGGACTGCATTATTCTTAGATTTATCCCAAACTTTGATGGGGAAGGTGGATGCCGTCCAATATTTCGAATTTATGGACAGGATCCTTTTCTTGCGGATAAAACTCCTAAAGTATTGTACTCAACGCCAAAGAAAAATAAAACTGTCCGAGCTTACAAGCAGGGAGAATGTGAACTAATTAAAATTGATATCAACTGCCACATCCAAGGTGATGTTGTGATTGAGAGCATTAACTTGAACGGTGACATAGACCTTGAGAAAATGATGTTCCGAGTCATGTTCAACACAACTTTTATTAGGTCGAATATACTGATGCTTAACCGGGATGAAGTTGACATTTTATGGGACAATAAAGATCACTTCCCAAAGGATTTTAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCCACTGTCATTGCGAATCGCACTTCATGCTTTGAGGAGAAGGAAGGACTGCCAGTGGAAGCATTTGCCAAAGTTCAAGAGATCTTTAACCGTGTGGACTGGTTGAATCCTAAGGCAGATGTTGCTCTAGAGGTACTCCAAAATATGAGTGGTTCAGCTTCTGCTCAGCATGTGGATACTGAATCTTTGTTACATGAAAAAAGTCCTAAAATGCCTTTGGGGAAAAAGAATGAGGAAAAAAGATTAGTTTCCTCAAATTTGGAAATCAAGTTCATGTCTGCAACTAAGCAATCCATGGATAATCATAGTAAAAAAGGGGATGAGCCTGTCAAGATTGGGGCAACTGCACAACTACCACGCTGTCAGAAGGTGCCCATTGCTTCTATAAGCACCTCAGAGTCCAGTAAATATGAGAAAACACCAGCAAAACTTGCCTTAAAACCACAGGTGGATGGTCTTGCCTTTACTGGTTCTATGGATACTTCTGGTGTTCCACTTTCACCAGGAACACCTCCACTTCAGCCTTCTTTGATTAGTAATTCTGAAAGGGCTCATGATACTCCTCTCCTAGTGCAACCACCTCCTCATAATCTTTCTCCTTTGAAATCAGGTTATCCTGCTACTGGAGAAAATGAAGCCCCATCAGAGGACAGATGTCATTCATCTATTTTTAGCTCTACATCTGGAACTTCATTATCAAGTACATTTCCAAATAAGTTGCCTTCTGATGCTGCTTCCCATCCTTCAGCTTTGCCAATTACTTCAATTCAGTCACCTGCTACCCCTACTACCCCTTTGAAAGAGATTTTACATGTTAAAACTAGACCTGCTTCATCCACTTCACAACTCACATTGCCACCTACTCCCCCAACATTTGGTCCCCCAGCGCCTCTTTCTCCTCTAACACCTCCTGAAAAGGAGCACAAAATGGTTAGAGCCACACCGCTGCCACCACCACCTCCACAGAAGGAGGAATCCTGGGTTAGAGCTGTGCCTCCTCCACCAAAGGAGGAATCACATGGTCAACATAGACCTGGACCCCCTCCTTGTCCACCACCACCTTTAAAGGAGGAACTGCCTGTTAGAGCTAGACCTCCATCACCTCCACCTCTTCCATGTCCTTCTGGGAAATCTGTAGATCCTACTATAGCACCATTACCAGCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGCTGCTGCTGCTGCTGCAACACTTTCCTCCAAGTACCCTGATACTTCATTGCAGAATTCTTCACCTGTTCCCGTTGCTCCTAATGCTCCACCACCTCCAATTCCCTTTGGTAAAGGAGATCTAAAATCAGGGAATAATGTTCCAGGATCTTTCTCCAGTATGTCAAGTTCTATGGGATCTCAACGAAGTCTATCACGTACAATAAATTTTAAAAATCAAAATAAAAAGTTGAAGCCATTGCATTGGTTGAAAATATCGAGAGCAGTGCAAGGAAGTTTGTGGGCTGAGGCACAGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTAGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCTCTGTCAAGAAATCTGGTGTCAACAACTCAGTTGGGCCTAAATCTGATAAAGTTCAACTGATTGAGCACAGACGAGCATATAATTGTGAAATCATGCTTTCAAAAGTTAAAGTTCCATTGCATGATTTGATGAGCTCGGTGCTAGAACTAGAAGACTCGGCACTAGACATTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTATGAAAGAGGAGATGGAATTGCTCAAGGGTTACACTGGGGAAAAGGAGAAGTTAGGAAGATGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTGGAAACTAAACTTCGAGTTTTTTCATTCAAGATTCAGTTCCACTCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTAAATGCTGCAGCAGAAGAGATAAGGAGTTCTGTCAAATTGAAGAGAATTATGCAGACCATACTTTCCTTGGGTAATGCTTTGAACCAAGGAACTGCGAGGGGTTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGACACGAGCACGGAACAACAAGATGACCCTCATGCATTATCTTTGTAAGGTGTTGGTTGACCAACTGCCAGAAGTTCTAGACTTCTCCGATGATATTGCTAACTTAGAGCCTGCAGCAAAGGTCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCTATAAACAAAGGATTAGAGAAAATTATCCAGGAACTTTCAACCTCTGAAAATGACGGTCCTATATCAGAAACATTCCGCAAGAATTTGAAAGAGTTCCTCTCCTCTGCCGAAGCTGAAGTCCGGTCGTTGGCTTCACTATATGCTGGTGTGGGTAGGAATGTGGATGCATTGATTCTTTATTTTGGGGAAGATCCGGCTCGCTGCCCTTTTGAGCAAGTTGTCACAACTCTGCTCAACTTCACAAGAATGTTCAACAAGGCTCACGGAGAAAACTGCAAACAGCTTGAGCTTGAAATGAAAAAACCAGCAGATGGTGAGAAAAAGATATGTGAATCAGAACGAATATTACCGACTGCAATCCAGACTGGCTGTGAGCGTTAG 3669 0.4358 MTLLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYKVYMDGIVGQLREHLPDASVLVFNFREEGTKSQMANILSEYDITIMDYPRQYEGCPVLKMEVIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLHLLTPLNPIPSQVRYLQYISRRNVAIDWPPLDRALKLDCIILRFIPNFDGEGGCRPIFRIYGQDPFLADKTPKVLYSTPKKNKTVRAYKQGECELIKIDINCHIQGDVVIESINLNGDIDLEKMMFRVMFNTTFIRSNILMLNRDEVDILWDNKDHFPKDFRAEILFSEMDAAATVIANRTSCFEEKEGLPVEAFAKVQEIFNRVDWLNPKADVALEVLQNMSGSASAQHVDTESLLHEKSPKMPLGKKNEEKRLVSSNLEIKFMSATKQSMDNHSKKGDEPVKIGATAQLPRCQKVPIASISTSESSKYEKTPAKLALKPQVDGLAFTGSMDTSGVPLSPGTPPLQPSLISNSERAHDTPLLVQPPPHNLSPLKSGYPATGENEAPSEDRCHSSIFSSTSGTSLSSTFPNKLPSDAASHPSALPITSIQSPATPTTPLKEILHVKTRPASSTSQLTLPPTPPTFGPPAPLSPLTPPEKEHKMVRATPLPPPPPQKEESWVRAVPPPPKEESHGQHRPGPPPCPPPPLKEELPVRARPPSPPPLPCPSGKSVDPTIAPLPAPPPPPPPPPPPAAAAAAATLSSKYPDTSLQNSSPVPVAPNAPPPPIPFGKGDLKSGNNVPGSFSSMSSSMGSQRSLSRTINFKNQNKKLKPLHWLKISRAVQGSLWAEAQKSGEASKAPEIDMSELESLFSAAVPSSGSVKKSGVNNSVGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLELEDSALDIDQVENLIKFCPMKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVETKLRVFSFKIQFHSQVSDLRKSLNIVNAAAEEIRSSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLVDQLPEVLDFSDDIANLEPAAKVQLKFLAEEMQAINKGLEKIIQELSTSENDGPISETFRKNLKEFLSSAEAEVRSLASLYAGVGRNVDALILYFGEDPARCPFEQVVTTLLNFTRMFNKAHGENCKQLELEMKKPADGEKKICESERILPTAIQTGCER 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2168 1222 Gene3D - 198 340 - -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 749 763 - -
Bisa08g2168 1222 SMART PTEN_C2_2 197 336 IPR014020 -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 500 526 - -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 785 804 - -
Bisa08g2168 1222 ProSiteProfiles Formin homology-2 (FH2) domain profile. 807 1206 IPR015425 -
Bisa08g2168 1222 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 653 668 - -
Bisa08g2168 1222 SMART it6_source 807 1217 IPR015425 -
Bisa08g2168 1222 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 337 IPR035892 -
Bisa08g2168 1222 SUPERFAMILY Formin homology 2 domain (FH2 domain) 729 1197 - -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 684 716 - -
Bisa08g2168 1222 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Bisa08g2168 1222 Coils Coil 1087 1111 - -
Bisa08g2168 1222 Pfam Formin Homology 2 Domain 812 1180 IPR015425 -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 723 742 - -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 558 604 - -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 496 804 - -
Bisa08g2168 1222 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Bisa08g2168 1222 Gene3D Formin, FH2 domain 806 1191 IPR042201 -
Bisa08g2168 1222 MobiDBLite consensus disorder prediction 627 642 - -
Bisa08g2168 1222 PANTHER FORMIN-J 1 695 - -
Bisa08g2168 1222 Gene3D Protein tyrosine phosphatase superfamily 15 197 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2168 Bisa-ChrBisa08 51627147 51642614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2168 783 1204 Protein tyrosine phosphatase (PTP) family AT5G58160 71.868 0.0 615