Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2162 ATGGGTTTGGGGGTATTTGGTTCTGTTTTGTTTCTGACGCTTCTCTTCAAGCATTTGGCATGCCAGCAGCCAAATACCGATGGCTCCTTCTTGTCTGAGTTCTTGAAGATGGGTTTATCTTCTACTACCTCGTCCTCCCAATCCTACAACTTCTCTGGTTCTTTTTGTTCATGGCAAGGGGTTTCTTGCGATGCCCAAAAAGAACACGTCGTTGAGTTCACAGCTTCTGGTATAGGCCTCTCTGGCCTTGTTCCTGATAACACCATTGGCAAACTCAGCAAGCTTCAATCCTTGGATCTTAGCAGCAACAATATCACTGGGTTGCCATCAGATTTCTGGAGTTTATCCTCGCTCAAGAGTCTCAACCTCTCGTTTAATCAGATTTCTGGCTTGCTGCCAAACAACATTGGCAATTTTGGTTCGCTGGAAATCCTAGACTTGTCAAAAAACAATCTCTCCCAAGAAATTCCTGAAGCTCTAAGCTCCCTTGTTAGTCTTAGGGTCCTCAAACTTAGCAACAACAGGTTCGAACAGAGCATACCTTCAGGGATTCTCAAGTGTCACTCTCTAGTTTCACTCGATCTTTCATCAAATCGGCTGAATGGGACTCTTCCGGATGGATTTGGTACCTCCTTTCCAAAGCTCAAAACATTGAACCTTGCAGGGAATAGTATTTATGGTCGTGCTTCAGACTTTTTTGGGTTGAATTCACTCGCTACTCTCAATATATCTGGAAATTCGTTTCAGGGTTCGGTAATGAGTGCGTTTATGGAAAGCGTGGAGGTGCTTGACCTTAGCAAGAACCAATTTCAAGGTCACATTTCTCAGGTACAATTCAACTATAATTACAATTGGTCTCGTTTGGTTTATTTGGACTTGTCTGAGAATCAGCTTAGTGGGGAAATTTTCCAGAATTTGAATGAAGCCCAGAATCTGAAACACCTTAATCTTGCACATAATAGATTTACCAGACAGAATTTCCCACAGATTAAAATGTTCTCTTTGTTGGAACACTTGAACTTGTCTAAAACTAGTCTCGTTGGTCACGTTCCTGCTGAAATCTCACAACTGAGGTATTTGAATGTTCTTGATGTCTCTATGAATCATCTCACAGGGAATATCCCCTTACTGAGGAACAAAAACCTCCAAATTCTTGACCTTTCTGTGAACAATTTGAGCGGTGAGATCCCTCAATCTGTGTTAGATAAGCTCCCGTGGATGGAGAAATATAACTTCTCATATAATAACTTAACCTTCTGTGACTCAAAATTCAACCCCCAAATCCTCAAAACAGCATTCTTTGGATCAGTTAATAGTTGTCCAATTGCTGCAAACCCAACTCTTTTCAAAAGAAGAGCCAGTGAACATAAAGGAATGAAGCTAGCTCTGGCATTGACCCTAGCAATGATCTGCCTTCTTGCTGGGCTTCTATTCCTAGCATTTGGTTGCAGAAGGGAAACAAAAATGTGGGCGGGGAAGCAAACTTCATATAAAGAAGAACAGAACATCTCAGGACCATTCGAATTTCAGACTGATTCAACAACTTGGGTGGCTGATGTCAAGCAGGCAACTTCGGTCCCAGTAGTAATCTTTGAGAAGCCATTGCTGAATATCACGTTTGCAGACCTCTTGTCTGCAACTTCAAACTTCGATCGAGGTACCCTTTTGGCTGAAGGGAAATTTGGGCCTGTTTATAGAGGCTTTCTACCTTGTGGGATTCATGTAGCTGTTAAAGTTTTAGTCAGTGGATCAATGTTGACAGATCAAGAAGCTGCAAGAGAGCTTGAATATCTTGGTCGGATCAAGCACCCAAATCTTGTTCCTTTGACTGGGTATTGTTTAGCCGGAGATCAAAGGATTGCCATTTATGATTACATGGAGAATGGGAACTTGCAGAACTTGCTCTATGACTTGCCACTGGGGGTGCAGAGTACAGAAGATTGGAGCACGGACACATGGGAAGAAGATGACAATGGTAGTGGGATTCGAAATGCTGGCTCTGAGGGATTACTCACAACTTGGAGATTTCGTCACAAGATTGCCCTTGGCACTGCTCGAGCATTGGCCTTTCTTCACCATGGCTGCTCACCTCCAATTATCCACAGAGATGTTAAGGCTAGTAGTGTTTATCTGGACTACAATCTAGAGCCTCGGTTGTCTGATTTTGGGCTGGCTAAGACTTTTGGAAACAGCTTGGACGAGGAAATTGCTCGCTGCTCACCTGGTTATGTTCCACCGGAGTTTTCTCAACCAGAATACAACTCCCCAACACTGAAATCTGATGTGTACTGTTTTGGGGTAGTTCTGTTTGAGCTAGTAACTGGGAAAAAACCAGTTGGGGATGAGTATCCTGATGAAAAGGAATCAACTTTGGTTGGTTGGATGAGAGGACTGGTAAGAAAGAACCAAGCTTCTAGAGCCATTGATCCGAAAATTCGTGATACAGGACCAGATGAACAGATAGAGGAGGCTCTTAAGATTGGTTATCTTTGCACAGCTGATCTCCCCTTAAAGCGGCCTACCATGCAGCAGATAGTTGGACTTCTTAAAGATATTGAGCCTTCTGCTATTTAG 2574 0.4301 MGLGVFGSVLFLTLLFKHLACQQPNTDGSFLSEFLKMGLSSTTSSSQSYNFSGSFCSWQGVSCDAQKEHVVEFTASGIGLSGLVPDNTIGKLSKLQSLDLSSNNITGLPSDFWSLSSLKSLNLSFNQISGLLPNNIGNFGSLEILDLSKNNLSQEIPEALSSLVSLRVLKLSNNRFEQSIPSGILKCHSLVSLDLSSNRLNGTLPDGFGTSFPKLKTLNLAGNSIYGRASDFFGLNSLATLNISGNSFQGSVMSAFMESVEVLDLSKNQFQGHISQVQFNYNYNWSRLVYLDLSENQLSGEIFQNLNEAQNLKHLNLAHNRFTRQNFPQIKMFSLLEHLNLSKTSLVGHVPAEISQLRYLNVLDVSMNHLTGNIPLLRNKNLQILDLSVNNLSGEIPQSVLDKLPWMEKYNFSYNNLTFCDSKFNPQILKTAFFGSVNSCPIAANPTLFKRRASEHKGMKLALALTLAMICLLAGLLFLAFGCRRETKMWAGKQTSYKEEQNISGPFEFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPCGIHVAVKVLVSGSMLTDQEAARELEYLGRIKHPNLVPLTGYCLAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTEDWSTDTWEEDDNGSGIRNAGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKTFGNSLDEEIARCSPGYVPPEFSQPEYNSPTLKSDVYCFGVVLFELVTGKKPVGDEYPDEKESTLVGWMRGLVRKNQASRAIDPKIRDTGPDEQIEEALKIGYLCTADLPLKRPTMQQIVGLLKDIEPSAI 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2162 857 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Bisa08g2162 857 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Bisa08g2162 857 SUPERFAMILY Protein kinase-like (PK-like) 527 849 IPR011009 -
Bisa08g2162 857 Gene3D Phosphorylase Kinase; domain 1 510 625 - -
Bisa08g2162 857 FunFam Calmodulin-binding receptor kinase CaMRLK 258 376 - -
Bisa08g2162 857 Pfam Protein tyrosine and serine/threonine kinase 554 847 IPR001245 GO:0004672|GO:0006468
Bisa08g2162 857 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 235 852 - -
Bisa08g2162 857 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 109 204 - -
Bisa08g2162 857 Gene3D Ribonuclease Inhibitor 183 280 IPR032675 -
Bisa08g2162 857 Gene3D Ribonuclease Inhibitor 378 452 IPR032675 -
Bisa08g2162 857 ProSiteProfiles Protein kinase domain profile. 550 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2162 857 Pfam Leucine Rich repeat 93 107 IPR001611 GO:0005515
Bisa08g2162 857 Pfam Leucine Rich repeat 379 395 IPR001611 GO:0005515
Bisa08g2162 857 Gene3D Transferase(Phosphotransferase) domain 1 626 856 - -
Bisa08g2162 857 ProSiteProfiles Leucine-rich repeat profile. 141 164 IPR001611 GO:0005515
Bisa08g2162 857 Gene3D Ribonuclease Inhibitor 281 377 IPR032675 -
Bisa08g2162 857 Gene3D Ribonuclease Inhibitor 25 182 IPR032675 -
Bisa08g2162 857 PRINTS Leucine-rich repeat signature 115 128 - -
Bisa08g2162 857 PRINTS Leucine-rich repeat signature 95 108 - -
Bisa08g2162 857 FunFam Putative LRR receptor-like serine/threonine-protein kinase 511 625 - -
Bisa08g2162 857 ProSiteProfiles Leucine-rich repeat profile. 94 115 IPR001611 GO:0005515
Bisa08g2162 857 SMART LRR_typ_2 163 187 IPR003591 -
Bisa08g2162 857 SMART LRR_typ_2 188 211 IPR003591 -
Bisa08g2162 857 SMART LRR_typ_2 115 138 IPR003591 -
Bisa08g2162 857 SMART LRR_typ_2 139 162 IPR003591 -
Bisa08g2162 857 SMART LRR_typ_2 92 114 IPR003591 -
Bisa08g2162 857 SMART LRR_typ_2 212 235 IPR003591 -
Bisa08g2162 857 SUPERFAMILY L domain-like 48 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2162 Bisa-ChrBisa08 51498617 51501190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2162 80 853 Receptor kinase-like Gene Family AT4G39400 34.426 1.67e-114 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Bisa08g2162 PK_Tyr_Ser-Thr 1.4e-33 CL0016