Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2139 ATGTCAACTAGACAATTTAATCATCTAGATATCCATGCTGCAATTGTCAAGAGTAATACAACTATGATCAATTATTGTGGTAGAGCTGCTGTTATATTTTTTAAGATGGATGATAATATCGAAGACTATGTGATCTTACAGACTTGTGATGCAAGGACATGCCATCCAAATTCATGGATGAACATCTTCTCCATGGACTGTGTGAACCTATCTATTTCAAATATGATGAGATCATCACGATTGTCCACGAAGAGGAACATGGCGGCCATAACCCCGACATCTGTGATGAAACTTTACTCTTTCAACATTCAAAATAAACAAATAGCATCTGTTGTTATCTACTCAGCCTCTGAGTGCTCAGGTGCACAGGGATCCCCCGCCTCCATTCACCAAGCAGAGAAATTATACATATCAGACATGGCAGTCACACTTCCTAACGTTAACTCCCCATCTGGGCTAAAGAAGCTTGATGAATACCTTCTCTCCCGCAGTTATATCACTGGGTACCAAGCTTCAAAGGACGACATTACAGTATATGCCGCCTTGTCAAGGGCCCCGTCGGCTGAATATGTGAACGTGTCCCGGTGGTACAAGCACATTGATGCTTTATTGAGAATATCTGGTGTTTCTGGTGAGGGATCTGGTGTCACTGTGGAGGGATCTGTTCCCATAACAGAGGAGACCATTGCCACTCCTCCACCTGCTGACACAAAGGCCACATCAGCTGATGATGATGATGATGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAGGAGGAGAAGAAGGCTGCTGAAGAAAGAGCAGCTGCTGTGAAGGCATCTGCCAAAAAGAAAGAGTCCGGGAAGTCATCTGTTCTGTTGGATGTGAAGCCATGGGACGATGAAACAGACATGAAAAAACTTGAAGAAGCAGTGAGAAGTGTTAAGATGGAGGGGCTGCTTTGGGGTGCTTCCAAACTTGCTCCTGTTGGGTACGGTATCAAGAAATTGCAAATTATGCTTACTATTGTCGATGACCTCGTGTCTGTGGACAACCTCGTTGAGGATCATCTCATGAATGAGCCAATTAACGAATATGTCCAGAGCTGTGACATTGTGGCCTTCAATAAAATATAATCTGGGATTCATGGGACTCGGATAGTGTGTCAATGGCAGAAAAGAGAAGTTTCTAATGTTAAGATATTAGTGCCGCTGCCATGTTTTGAGATTTTTTATTTCTTTAAACCTTCTGGTACTTTCAATACGTTGTATTATGTTTAG 1263 0.426 MSTRQFNHLDIHAAIVKSNTTMINYCGRAAVIFFKMDDNIEDYVILQTCDARTCHPNSWMNIFSMDCVNLSISNMMRSSRLSTKRNMAAITPTSVMKLYSFNIQNKQIASVVIYSASECSGAQGSPASIHQAEKLYISDMAVTLPNVNSPSGLKKLDEYLLSRSYITGYQASKDDITVYAALSRAPSAEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSVPITEETIATPPPADTKATSADDDDDDDDVDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVKMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLVSVDNLVEDHLMNEPINEYVQSCDIVAFNKIXSGIHGTRIVCQWQKREVSNVKILVPLPCFEIFYFFKPSGTFNTLYYV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2139 420 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 147 372 - -
Bisa08g2139 420 SMART EF1_GNE_2 283 372 IPR014038 GO:0003746|GO:0006414
Bisa08g2139 420 Gene3D - 276 372 IPR014717 -
Bisa08g2139 420 MobiDBLite consensus disorder prediction 222 263 - -
Bisa08g2139 420 SUPERFAMILY GST C-terminal domain-like 133 206 IPR036282 -
Bisa08g2139 420 Coils Coil 255 275 - -
Bisa08g2139 420 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 247 255 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bisa08g2139 420 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 361 372 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bisa08g2139 420 SUPERFAMILY eEF-1beta-like 280 372 IPR036219 -
Bisa08g2139 420 CDD EF1B 281 372 IPR014038 GO:0003746|GO:0006414
Bisa08g2139 420 FunFam Elongation factor 1-delta 1 142 217 - -
Bisa08g2139 420 Gene3D - 78 217 - -
Bisa08g2139 420 MobiDBLite consensus disorder prediction 241 256 - -
Bisa08g2139 420 FunFam Elongation factor 1-beta 1 like 277 372 - -
Bisa08g2139 420 Pfam EF-1 guanine nucleotide exchange domain 285 372 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2139 Bisa-ChrBisa08 50861841 50866301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2139 144 372 Eukaryotic Initiation Factors Gene Family AT2G18110 79.476 1.73e-114 333