Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2136 ATGGACGTCCTTATAGAGTCTTTCTCCGGTGCGCATTACTCCGGTTGGCGTCCTTCCACGCCGTCCTCTTCTTTCTCCTTCTATCCGCGTGGTGACTCCTCTATCAGCGGCCCCTCGCAGCCCTTTGTAATCGGGGTCTCTGGAGGTACGGCATCTGGCAAGACGACAGTATGTGATTTGATCATTCAACAACTGCAAGACCATAGAGTTGTGCTCGTCTGTCAGGATTCATTCTACCGTGGTTTAACGGACAATGAATCGAAACATGTCAGTGAGTATAATTTTGATCATCCTGACGCATTTGATACTGAGCAACTCGTAGACTGTATCAGCAAGCTTAAAAATGGCGAGTCTGTTCAGGTTCCAATATACGATTTTAAAAAACATCAGCGGTGTTCTGACAAATTTAGACAGGTCAATGCATCTGATGTAATCATTTTGGAGGGTATATTAGTTTTTCATGAACAACGGGTCCGCAACATGATGAACATGAAAATATTTGTTGATACAGATCCTGATGTAAGGCTTGCCCGCAGATTAAGACGTGATACTGTTGAGAGGGGTAGAGATGTACAGTCATATTCAAAATTTGTTAAGCCTGCCTTTGATGATTTCATTCTTCCATCCAAAAAATATGCTGATGTCATAATACCTCGCGGGGGAGAGAACGAGGTAGCAATTGACTTGATCGTTCAACATATCCGCACTAAGCTAGGCCAACATAACCTCTGCAAAATATATCCGAATTTGAATGTTATCTACTCTACGTACCAGATTAGAGGCATGCACACTCTAATTCGTGACAAAGACATTTCAAAGCATGATTTTGCTTTTTATTCAGATCGGCTGATTCGTTTGGTAGTGGAACATGGTCTTGGCTATTTGCCATTTACAGAAAAGCAAGTTACCACACCGACAGGATCAATTTACACTGGAGTTGATTTTTGTAAGAAATTATGCGGAGTATCCGTTATTCGAAGTGGTGAAAGCATGGAGAACGCATTGCGTGCATGTTGTAAAGGGATAAAAATCGGAAAAATTCTCATCCACCGTGCAGGAGGTGATCAGACCCAGCTTATTTATGAGAAGCTTCCGAAAGATATTTCTGAGAGACACGTTCTCCTTTTGGACCCAGTACTCGGTACAGGTAATTCTGCCAGCCAAGCCATTGAGCTTCTCATACGTAAGGGAGTTCCAGAATCCCGGATTATATTCCTGAACCTCGTCTCTGCTCCTGAGGGAATACATCATGTATGTAGACGTTTTCCATGCCTGAAAATCGTCACTTCGGAGATTGAAGTTAAACTAAATGACGAGTTCCAAGTTATACCAGGGTTGGGAGAATTTGGTGACCGTTATTTTGGTACGGACGATTCTTGA 1380 0.4275 MDVLIESFSGAHYSGWRPSTPSSSFSFYPRGDSSISGPSQPFVIGVSGGTASGKTTVCDLIIQQLQDHRVVLVCQDSFYRGLTDNESKHVSEYNFDHPDAFDTEQLVDCISKLKNGESVQVPIYDFKKHQRCSDKFRQVNASDVIILEGILVFHEQRVRNMMNMKIFVDTDPDVRLARRLRRDTVERGRDVQSYSKFVKPAFDDFILPSKKYADVIIPRGGENEVAIDLIVQHIRTKLGQHNLCKIYPNLNVIYSTYQIRGMHTLIRDKDISKHDFAFYSDRLIRLVVEHGLGYLPFTEKQVTTPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHRAGGDQTQLIYEKLPKDISERHVLLLDPVLGTGNSASQAIELLIRKGVPESRIIFLNLVSAPEGIHHVCRRFPCLKIVTSEIEVKLNDEFQVIPGLGEFGDRYFGTDDS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2136 459 Pfam Uracil phosphoribosyltransferase 255 456 - -
Bisa08g2136 459 PANTHER URIDINE KINASE 33 367 - -
Bisa08g2136 459 Gene3D - 38 240 IPR027417 -
Bisa08g2136 459 SUPERFAMILY PRTase-like 240 457 IPR029057 -
Bisa08g2136 459 FunFam Uridine kinase 241 456 - -
Bisa08g2136 459 PRINTS Uridine kinase signature 187 198 - -
Bisa08g2136 459 PRINTS Uridine kinase signature 71 82 - -
Bisa08g2136 459 PRINTS Uridine kinase signature 116 131 - -
Bisa08g2136 459 PRINTS Uridine kinase signature 41 58 - -
Bisa08g2136 459 PRINTS Uridine kinase signature 173 183 - -
Bisa08g2136 459 ProSiteProfiles UvrC family, homology region profile. 147 226 IPR001162 GO:0009381
Bisa08g2136 459 CDD UMPK 43 237 IPR000764 -
Bisa08g2136 459 CDD PRTases_typeI 314 429 IPR000836 -
Bisa08g2136 459 NCBIfam uridine kinase 42 237 IPR000764 -
Bisa08g2136 459 FunFam Uridine kinase 38 240 - -
Bisa08g2136 459 Gene3D - 241 456 IPR029057 -
Bisa08g2136 459 Pfam Phosphoribulokinase / Uridine kinase family 43 225 IPR006083 GO:0005524|GO:0016301
Bisa08g2136 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 230 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2136 Bisa-ChrBisa08 50775894 50781254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2136 1 458 PRT Gene Family AT3G27190 75.417 0.0 728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2136 08 50775894 50781254 Bisa08g2136 08 50775894 50781254 ECH