Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2128 ATGGGGAGTAATTCCATCAATCCTCCGAGAACTCAAGCTTCATCTGGGTCTTCTCGTCCCAGAATTTCAGTTACCCTTTCTACAACCGTGTTTGGCCAATGTGCTGGTTCACAAGCCGCAGATTCTGCTTCTCCGAGCTTGTGTCTTTCTCTAAACCCAAGCAAGAGATGGGGCGAGCTGTTTTTTTTTGTTCTACACGCCCTTTTGGCTCACGCTATATCTTGGAATAGTCGTTCCCTTCAAACTATTCGACGTTTTTTCTTGTTATCCTTCCAGTTTCGTTTGAATGCAAAGAAAATGAAATATGTGCACGTGGATACAACGTGCGATGTTCCTTCTTTCTTGATACCTATGCTATTTGTTGGAAAGGCTGACAGAAGCATATCTTGGAAAGACCGCTATTGGGTAAAGGCAAGTATTGTTATGCAAATTCCATCTTACATGGAGACACTGGCTATTTCCAATGACTTGCCAAGAGTTGTTGTTGATGCTTTGGGTGCTGCAATGCTGTTTTGTAGAGTAGGTTTGAGTTACAGAATGGCTAGCTGTAGTTCTCTTTCATTGTCTCCGTACAGTATTTATTGCCGGCCAAACCCCAGAAGGCTTCCCATTTTATGCTCGGTTGGCTCTTCTTCTCTCGTGGGTGCTGAGGGATCTAAAGTACCCCGCAAAAGATTAAGAAGAATAGAAGGTCCTGGAAGAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCATTTTTATGAAGGACCTAATGGGCCTCCCCTTCGAGTTCTTCCTATTGGTGGGCTGGGTGAAATTGGAATGAATTGCATGCTTGTTGGGAATTATGATCGTTATATCCTCATTGATGCCGGTGTCATGTTTCCGGACCATGATGAGCTTGGAGTCCAAAAGATTATACCTGATACGACATTTATTAGAAAATGGAGCCACAAAATTGAAGCAGTTGTTATAACACATGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATACCGGCATTGGATTCTCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATCAGGAAACGTTTGAAGGAGCATGGTATTTTTGTTCCATCAAGACTCAAAGTTTTTAGAACAAAGAAGAAGTTTAGGGCTGGGCCATTTGAAATAGAGCCCATCCGGGTAACCCATTCTATACCAGATTGTTGTGGATTAGTTCTACGCTGTTCTGATGGTACTATTCTTCATACAGGGGACTGGAAGATTGATGAATCACCATTAGATGGAAAGACTTTTGACCGTGAAACTTTGGAGGAACTGTCTAAAGAAGGAGTAACATTAATGATGAGTGATTCAACAAACATACTTTCACCTGGAAGGACAATCAGTGAATCTATCGTGGCAGATGCATTATTAAGGCATATTTCAGCTGCTAAAGGGAGGGTTATTACAACCCAGTTTGCATCGAATATACATCGTCTTGGAAGTGTGAAAGCTGCGGCTGATTTAACTGGTAGAAAGTTGGTATTTGTTGGAATGTCTTTACGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCACCATTTGATCCATCCACTCTGGTAAAAGTGGAGGATATTGATGCTTATGCTCCTAAGGATCTGTTAATTGTAACAACTGGATCTCAGGCAGAACCACGTGCTGCCTTGAATCTTGCATCCTATGGGGGTAGTCATTCTTTCAAACTGACCAAGGAAGATATAATTTTGTATTCAGCTAAGGTTATCCCTGGCAATGAGTCTCGTGTTATGAACATGCTAAACCGCATATCAGAGATTGGATCATCAATAGTTATGGGGAAGAATGAAGGGCTGCACACATCTGGTCATGGATATCGTGGAGAATTGGAAGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATACATGGAGAACTCCTATTCCTGAAGGAGCATGAATTACTTGGAAAGTCAACTGGCATTCGACACACTACTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCACATTTAAGAAATAGAAGAGTCCTTTCTAATGGTTTTGTTTCCCTTGGAAAAGAGAATTTACAGCTGAAGTATAGTGATGGGGACAAAGCATTTGGTTCATCAAGTGAACTCTTTATTGATGAAAGATTAAGAATTGCTTTAGATGGCATTATTGTGGTCAGCATGGAAATATTTCGCCCTCAAAATTTTGAGAGTCACGCTGATAATACCTTAAAAGGGAAGATAAAAATCACCACAAGATGCCTATGGCTCGACAAAGGGAAGCTGTTAGATGCACTTCATAAAGCTGCTCATGCTGCACTTTCAAGCTGCCCTGTAAACTGTCCATTGGCTCACATGGAAAGAACTGTATCTGAGGTATTGCGGAAGTTGGTGAGGAAATATAGTGGCAAAAGGCCAGAAGTTATTGCCGTTGCCATAGAAAACCCTGCAGCTGTTCTTGCTGATGAGGTGAAAACAAGGCTGTCAGGAAAATCTCATTTGGGTCTTGGGATATCAGCATTGAGAAAAGCAGGGGATGGACGAACAGAGGAAAATCAGTCCACTAAAATGCCAGTAAAAGGAGATGATGACACTGTTGCCGAGGGATTATTAGCTGAGGAAGATGATATTGTAACTCCTAGTGGAGCTGAGGGTGATTCCCTAGATTCAGAGGATTCAGATGAATTTTGGAAATCATTCATAAAACCGTCTACTGTTGGGAAGTCAATCAAAGCTAACAATGGTTATGTTCCACGAAAAGAGCATGAGTCACAGCTGAAGAATGATGGTTCTGAAGACGCTGAAGAAGAATATTCCGAAAAGACGTTAAATTCTGAACCCAAGCCTTCAAAAACAGTGAAGAGAAATAAATGGAAGCCTGAGGAAGTTAAGAAGCTAATTGGCATGCGTGGGGAGCTGCATGAAAGGTTTCAAGTTGCGAAGGGAAGAATGATCCTCTGGGAAGAGATATCTCAAAAGTTGTCGGCTGATGGGATCAACAGAAGTCCAGGGCAGTGTAAATCTCTCTGGACTTCTTTGATGCAGAAATATGAGGAGATGAAGAACAAGGAAAGCAAGAAGAGCTGGCCATTCCTTGAGGATATGGACAGGATAATGTGTGATAGAGATAACGAGGCATTAGCAGCAAAATGA 3153 0.4177 MGSNSINPPRTQASSGSSRPRISVTLSTTVFGQCAGSQAADSASPSLCLSLNPSKRWGELFFFVLHALLAHAISWNSRSLQTIRRFFLLSFQFRLNAKKMKYVHVDTTCDVPSFLIPMLFVGKADRSISWKDRYWVKASIVMQIPSYMETLAISNDLPRVVVDALGAAMLFCRVGLSYRMASCSSLSLSPYSIYCRPNPRRLPILCSVGSSSLVGAEGSKVPRKRLRRIEGPGRSMEDSVQRKMEHFYEGPNGPPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDHDELGVQKIIPDTTFIRKWSHKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIRKRLKEHGIFVPSRLKVFRTKKKFRAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKTFDRETLEELSKEGVTLMMSDSTNILSPGRTISESIVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPFDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSFKLTKEDIILYSAKVIPGNESRVMNMLNRISEIGSSIVMGKNEGLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGSSSELFIDERLRIALDGIIVVSMEIFRPQNFESHADNTLKGKIKITTRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSEVLRKLVRKYSGKRPEVIAVAIENPAAVLADEVKTRLSGKSHLGLGISALRKAGDGRTEENQSTKMPVKGDDDTVAEGLLAEEDDIVTPSGAEGDSLDSEDSDEFWKSFIKPSTVGKSIKANNGYVPRKEHESQLKNDGSEDAEEEYSEKTLNSEPKPSKTVKRNKWKPEEVKKLIGMRGELHERFQVAKGRMILWEEISQKLSADGINRSPGQCKSLWTSLMQKYEEMKNKESKKSWPFLEDMDRIMCDRDNEALAAK 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2128 1050 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 613 654 IPR011108 -
Bisa08g2128 1050 Gene3D - 260 672 IPR036866 -
Bisa08g2128 1050 Pfam Myb/SANT-like DNA-binding domain 955 1038 IPR044822 -
Bisa08g2128 1050 MobiDBLite consensus disorder prediction 1 20 - -
Bisa08g2128 1050 SUPERFAMILY Metallo-hydrolase/oxidoreductase 256 670 IPR036866 -
Bisa08g2128 1050 ProSiteProfiles Myb-like domain profile. 950 1014 IPR001005 -
Bisa08g2128 1050 SMART Lactamase_B_5a 268 465 IPR001279 -
Bisa08g2128 1050 CDD GT1 956 1021 - -
Bisa08g2128 1050 MobiDBLite consensus disorder prediction 911 956 - -
Bisa08g2128 1050 PANTHER RIBONUCLEASE J 172 1046 - -
Bisa08g2128 1050 MobiDBLite consensus disorder prediction 872 894 - -
Bisa08g2128 1050 MobiDBLite consensus disorder prediction 915 956 - -
Bisa08g2128 1050 Pfam Beta-lactamase superfamily domain 279 415 IPR001279 -
Bisa08g2128 1050 Gene3D - 958 1019 - -
Bisa08g2128 1050 CDD RNaseJ_MBL-fold 259 670 - -
Bisa08g2128 1050 Gene3D - 457 607 IPR042173 -
Bisa08g2128 1050 MobiDBLite consensus disorder prediction 844 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2128 Bisa-ChrBisa08 50628312 50647680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2128 957 1042 Trihelix Transcription Factor Family AT2G38250 39.326 1.14e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa08g2128 Lactamase_B_2 6.1e-11 CL0381