Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2119 ATGGCGGCAGGGCGAGACAATGTTTTGAAGAGTAGAGTATCATACAAAAGTAGTTCCATTCAGGACTTTGATCAACATAGGAATGGTTCTTTTGGCGTGGGATTGCATGGACCAAGCAAACACTATGTCACGTTTAATGGCGGGCATAGATCGTCTTCAAAATTTGAGGATTCAGGTCTTGAACGGGTTGGGTTTTGCGGTAAAAGAGAAGAGAGAGAGAAGGGTGAGTTTTATAGAGATGACGGGGAATATGAACCTGCCACTGGGTTTAAGGATGACACCAAAATCGAGGACAGTGAAAAAGCTTTGGCACCACCAGAGAAGAGAAGAAAATTTTCACCAATTGTATGGGACCTAGCAGAAAGGGAAGTAAGAGTTTCTTCCAAAAACAGGATCACAGAGGTTAATGCTCTGTTTCCAAATTCTCCATCCCTACCATACGCTCAGGAAGCCAATGGCAGTGATGTTGTTAATCCCGAGTCTCCAGTTGATTCCTCTGATGCATTGCCTCAAGAGCATTCAGTGAATGAGGGCAAAGATGCTGATCGGTCTGAAGAAAACCATGTGCTCGGTTGGAATATCGGAATGTCAAGATGGGCATCTGATGGTTCCCCAAGGGATGTGTTTGAAGATGAACAGATTCGTGGCAATGGGAGCTCAAGTCTAGAGAGTGGTGAATTTAGAGGAGAGAGTTCGGAAGGAAAAAGAACTAGATCATCAGGAAGCAGTGGAGGAGGTCATTATTTGGGCCCTTCAAGTGAAGAAGATACTGATTCTGAAATGGAGTTCCTTGTTCCAGACACAATGGATGATGACGAGGAACATAGTGAAACTACTCATGTTAGTCATCCTTTGTCAGATTCCGAAGATAGTGGCAGTTCAATGCAGGTGCAAAGAAACATAAACATGCTCCAGAGTTGCAGAAGCGTGTTTGAATTTGAGATGATTAAGAAAATAAATGAAGGAACTTACGGTGTTGTCTATAAAGCTAGAGATAAGAAGACTGGGGAAATAGTAGCTTTAAAGAAGGTGAAGATGAATATAGATAGGGATGGCTTTCCTCTCTCTTCTTTGAGGGAAATAAATATACTCTTATCGTTTAATCATCCTTCCATCGTGAATGTTAAAGAAGTGGTTGTGGATGATTTCGATGGTGTTTTTATGGTAATGGAGTACATGGAATATGACCTGAAGGGGCTGATGGAGTTGATGAAGCACCCCTTTAGTATAAGTGAAATAAAATCCTTTATGAGGAAACTTCTTGAGGGCATTAAGTATCTCCATGACAATTGGATTCTCCACAGGGATTTGAAGACCTCAAATATTCTAATAAACAAAGAGGGTGAGCTGAAAATATGTGATTTTGGGTTATCTCGTCAGTATGGAAGCCCACTAAAGCCATATACTCCTGTTGTGGTCACTCTATGGTATAGAGCTCCTGAGCTGCTGTTAGGTGCTAAAGAATACTCAACGGCAATTGACATGTGGTCTGTGGGTTGTATAATGGCTGAATTAATTGCCAAGGCTCCTCTTTTTAAGGGAAAATCTGAAGTTGAACAGCTTAATAAGATTTTCCAAACCTTGGGTACACCCAGCGAGAAAATTTGGGCTGGATTATCCAAATTACCTGGATCTAAGGCTAACTTTGTTAAGCAACCGTATAATCTGTTGCGGAAGAAGTTTCCTGTTGCATCTTTTACTGGATCACCTGCTCTCTCTGAATTGGGTTTTGACTTGTTGAGCAAGCTTCTAACCTATGACCCTGAAAAGAGGATAACTGCAGAAGCTGCTCTTCTTCATGATTGGTTTCAGGAATCCCCTCTCCCCAAATCTGACTTCAATTCTACTTTTCCTTCACAGCGTGGCTAG 1869 0.4179 MAAGRDNVLKSRVSYKSSSIQDFDQHRNGSFGVGLHGPSKHYVTFNGGHRSSSKFEDSGLERVGFCGKREEREKGEFYRDDGEYEPATGFKDDTKIEDSEKALAPPEKRRKFSPIVWDLAEREVRVSSKNRITEVNALFPNSPSLPYAQEANGSDVVNPESPVDSSDALPQEHSVNEGKDADRSEENHVLGWNIGMSRWASDGSPRDVFEDEQIRGNGSSSLESGEFRGESSEGKRTRSSGSSGGGHYLGPSSEEDTDSEMEFLVPDTMDDDEEHSETTHVSHPLSDSEDSGSSMQVQRNINMLQSCRSVFEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIDRDGFPLSSLREINILLSFNHPSIVNVKEVVVDDFDGVFMVMEYMEYDLKGLMELMKHPFSISEIKSFMRKLLEGIKYLHDNWILHRDLKTSNILINKEGELKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELIAKAPLFKGKSEVEQLNKIFQTLGTPSEKIWAGLSKLPGSKANFVKQPYNLLRKKFPVASFTGSPALSELGFDLLSKLLTYDPEKRITAEAALLHDWFQESPLPKSDFNSTFPSQRG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2119 622 FunFam cyclin-dependent kinase G-2 isoform X1 298 394 - -
Bisa08g2119 622 ProSiteProfiles Protein kinase domain profile. 313 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2119 622 SMART serkin_6 313 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2119 622 PANTHER CELL DIVISION PROTEIN KINASE 312 609 - -
Bisa08g2119 622 FunFam Cyclin-dependent kinase G-2 395 622 - -
Bisa08g2119 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Bisa08g2119 622 MobiDBLite consensus disorder prediction 77 108 - -
Bisa08g2119 622 SUPERFAMILY Protein kinase-like (PK-like) 308 608 IPR011009 -
Bisa08g2119 622 MobiDBLite consensus disorder prediction 139 172 - -
Bisa08g2119 622 Pfam Protein kinase domain 313 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2119 622 Gene3D Phosphorylase Kinase; domain 1 289 394 - -
Bisa08g2119 622 MobiDBLite consensus disorder prediction 270 296 - -
Bisa08g2119 622 Gene3D Transferase(Phosphotransferase) domain 1 395 616 - -
Bisa08g2119 622 CDD STKc_CDC2L1 307 603 IPR045267 GO:0004674|GO:0005524|GO:0006468
Bisa08g2119 622 MobiDBLite consensus disorder prediction 173 187 - -
Bisa08g2119 622 MobiDBLite consensus disorder prediction 139 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2119 Bisa-ChrBisa08 50552103 50554466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2119 308 609 Core Cell Cycle Gene Families AT5G10270 46.541 4.80e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Bisa08g2119 Pkinase 7.1e-73 CL0016