Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2108 ATGGCTCCTCTTTATAGCGCTTTCCAAGGAGAGTTAAGCGGTTGTGATCAGACACAGGTAGTAGGCCTTGGTTTCCATATTTCCTCAATGGGTAGTTTTGCCTATCCTCATCTTCTGCCTACTATAGAAGCCAGAGCTTCTTCTCCTTGGACCCTTCCTTTTTTCGATGAAACCAATGAAAATAGTAACAAAAGGATAAAGAGAATCACAAGCATCCCAGAAGCCCTTGGAGATTACAAAGGCCATTCAAGCAGTGGAGTTAGTGATTGCTACAGAAGTCTCAGCAGAAACAACAGTGTGAATAGCCTTCCAAAGCTCCATTTCAGAGACCACATATCGACTATTGCTCAGAGATATTTTGCTTCTAAAGAGGCAGCACAAGAAGACATGGTCAGTTCTGAAAAAGAACAAGAAGATGGGTCTTGTGCTGATGGGATGAGGCTTGTGCAGCTTTTAATTGGTTGTGCCGAAGCCGTTGCTTGTCGTGACCGATCACACGCTTCCATTTTACTCTCTGAACTAAGATCAAATGCTTTGGTGTTTGGCTCTTCGTTCCAGCGAGTGGCTTCCTGTTTTGTCCAAGGTTTAGCCGAAAGGCTCACGATGGTTCAACCGGTTGGAACTGTGGGGAATATGGAACCCATGATGAACATTATGGACGTGGCCACAGAAGAAATGGAGGAAGCATTTCAGTTGGTTTATGAGATATGCCCACACATTAAGTTTGGTCACTTTGTAGCCAATGCCACAATATTGGAAGCCTTTGAGAGTCACAGTTTTCTTCATGTGGTTGACCTTGGGATGAGCCTTGCTCTCCCACATGGCCACCAATGGAGGGAATTGATCAAGAGCCTTGCTAATCGATCAGGCCCGGCTATTCGTCGCCTTCGAATTACGGGGGTTGGCCTTTGTGTTGAGAAACTCCGATGCATCGGTGGGGAACTCGAAGTTTATGCCAATAACATGGGGATCAATCTGGAGTTCTCAGTGGTGGAAAAGAACTTGGAAAATTTGCACACTAATGACATCAAGGTGAATGATGAAGAGGTTCTGGTGGTTAATAGCATTCTTCAGTTGCACTGTGTGGTGAAGGAGAGTCGAGGGGCTTTGAACTCGGTGCTTCAGATGATTCATAGGCTTTCGCCAAAAGTGTTGGTTATGGTCGAGCAGGACTCGAGCCACAACGGACCCTTTTTTCTCGGGAGGTTCATGGAAGCACTCCACTATTACTCTGCTATTTTTGACTCTCTGGATGCTATGTTGCCTAAGTATGACACCAAGAGAGCAAAAATAGAACAATTCTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGCGAGGGACCGGCGAGGGTGGAGAGGCACGAGAAGGTGGACCAGTGGCGAAGGAGGATGAGTAGGGCCGGGTTTCAGGGGGCACCTATGAAGATGGTGGCTCAGGCCAAGCAGTGGCTTCAGAAGAATAGTGTTTGTGACGGCTATACCGTCGTGGAGGAGAAAGGCTGCTTGGTGCTTGGGTGGACATCAAAGCCAATTGTGGCAGCTTCTTGCTGGAAATGTTGA 1563 0.4683 MAPLYSAFQGELSGCDQTQVVGLGFHISSMGSFAYPHLLPTIEARASSPWTLPFFDETNENSNKRIKRITSIPEALGDYKGHSSSGVSDCYRSLSRNNSVNSLPKLHFRDHISTIAQRYFASKEAAQEDMVSSEKEQEDGSCADGMRLVQLLIGCAEAVACRDRSHASILLSELRSNALVFGSSFQRVASCFVQGLAERLTMVQPVGTVGNMEPMMNIMDVATEEMEEAFQLVYEICPHIKFGHFVANATILEAFESHSFLHVVDLGMSLALPHGHQWRELIKSLANRSGPAIRRLRITGVGLCVEKLRCIGGELEVYANNMGINLEFSVVEKNLENLHTNDIKVNDEEVLVVNSILQLHCVVKESRGALNSVLQMIHRLSPKVLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPARVERHEKVDQWRRRMSRAGFQGAPMKMVAQAKQWLQKNSVCDGYTVVEEKGCLVLGWTSKPIVAASCWKC 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2108 520 Pfam GRAS domain family 148 519 IPR005202 -
Bisa08g2108 520 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 513 IPR005202 -
Bisa08g2108 520 ProSiteProfiles GRAS family profile. 139 519 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2108 Bisa-ChrBisa08 50355385 50356947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2108 145 520 GRAS Transcription Factor Family AT1G66350 37.076 7.23e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa08g2108 GRAS 1.8e-109 CL0063