Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2102 ATGAGAGAAGTGTGTGCCGAGTGTGCCCAGAAATGCCGTTCGGTTCACAGAAAAATGAAAAACACCTCAGATGTACCTTCTTCTTTCTTCAAAGTCATGATTGGCAGCGATTTTTCACGAGTTTTGTATCTGCCTCCTAAATTTGGTCCTACAGCATCAGCCTTGGCTCATAAAGAAGCTATAATTGAGGATTCTAGTGGACAGCAATGGAAGGTAATAGTATCAATTGTCAACAAGTCTTTTGCTTTCCAGGAAGGGTGGAATGTTTTTTCATTAGAGCATAGGCTTGAAGTTGGAAACTTTTTGGTATTCAATTACATTGGGGAATCGCACTTCGTTGTTAAGATCTATGATAAATCTGGGTGTGAAAAGATTAATTTCCCCAAAAAACAAAATCAGAAGAAACGAAGTAGGAGCAGAATGAACATTGTTGCTAGAGATGACACATTAAATAGGCGAGGTTCATATACTGAGTTCGATTTGGAAAAAACAAAAAACCAGCATGAGGTTGTTGATCTAGATGGAACAGAAAAAAACAAAGAGAATACTTCAGCGAATAACAATTGCGACAGAAGGGCCCAATCTTTGTACAAAGATAGTCAGAATGAGGACCCTTATTACATGACAAACCGAGACTTTGGAGACAAAGAAAGAGAGGACAGAAGTCCCATGCTTGATGTGTTCAGCTATGAAATATCGAACAATTATGGTGTTGATGGGACTGGCAAGTCTACAACTAGAAATGATATAGTTGATGCAAGTGTCTATAACAAAGATCCTTTGCTTGAAGAGATTTTGGGTAGAGAAGCAACTCAAGACCTGTCTGAATTTGAATTGACCGGAAGAAGCCATTTTCTTGAACAGATAGACAAGGATGCATGTGCCTGTGATGGACATTCTCATGGAGAAGAAATTCCTAAGCATCTTTTGATTACATATAATGTGCAACTTGAAGAAAACAGACAGAACAATTCCGTTATGTCTGACTGTGATATTCAAAAGTGCCAGTTTTCCGAGGTCTTAGATGCAGGGTTTCCAGGAGTTGTTCTGGAAGACAGGACTCAGAGTTTTCAAACAATCATTCAAGATCATGGCAGAATTCTTAATGAAGAGAAAGCTGAACCTTTTGACTATGGAGCTGCTCACAAAGCCGCCTTCATCTCGCGGACAACGAATATCGATGGAGAGAACAGTGGTGTTACTTCAGCGTCCACCGAGAAGACCAAGACCGAACCTTTATCATGA 1245 0.3976 MREVCAECAQKCRSVHRKMKNTSDVPSSFFKVMIGSDFSRVLYLPPKFGPTASALAHKEAIIEDSSGQQWKVIVSIVNKSFAFQEGWNVFSLEHRLEVGNFLVFNYIGESHFVVKIYDKSGCEKINFPKKQNQKKRSRSRMNIVARDDTLNRRGSYTEFDLEKTKNQHEVVDLDGTEKNKENTSANNNCDRRAQSLYKDSQNEDPYYMTNRDFGDKEREDRSPMLDVFSYEISNNYGVDGTGKSTTRNDIVDASVYNKDPLLEEILGREATQDLSEFELTGRSHFLEQIDKDACACDGHSHGEEIPKHLLITYNVQLEENRQNNSVMSDCDIQKCQFSEVLDAGFPGVVLEDRTQSFQTIIQDHGRILNEEKAEPFDYGAAHKAAFISRTTNIDGENSGVTSASTEKTKTEPLS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2102 414 ProSiteProfiles B3 DNA-binding domain profile. 27 120 IPR003340 GO:0003677
Bisa08g2102 414 Pfam B3 DNA binding domain 29 119 IPR003340 GO:0003677
Bisa08g2102 414 MobiDBLite consensus disorder prediction 393 414 - -
Bisa08g2102 414 SUPERFAMILY DNA-binding pseudobarrel domain 27 122 IPR015300 -
Bisa08g2102 414 PANTHER B3 DOMAIN-CONTAINING 26 216 - -
Bisa08g2102 414 CDD B3_DNA 28 118 IPR003340 GO:0003677
Bisa08g2102 414 SMART B3_2 29 120 IPR003340 GO:0003677
Bisa08g2102 414 Gene3D - 22 122 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2102 Bisa-ChrBisa08 50290613 50295020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2102 29 124 B3 DNA Binding Superfamily AT5G66980 37.000 2.25e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa08g2102 B3 9.8e-14 CL0405