Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2101 ATGCTCTTATTTAGTACTTCCATATCTTTCCGTCAGATCTGGTCATATCGATGCCTAGAGCTTGCGATTCGTTTTGAAGCTTCTTGTGTTCGTTGGATTCTGGCAAATTTCCGAAACTTCGTTTTCGCTTTTCGGTTGTCACAGGCAGGATTTGGACATAAACTAAGAAGAGATGAGAGAAGTTATCTGCCTCCAAAATTTGGTCCTACAGCATCAGCCTTGGTTCACAAGGAAGCCATTATTGAGGACTCAAATGGGCAGCAATGCAAGGTAGTAGTATCAATTGTGGACAAGGCTTTTGCTTTTCAGAAAGGATGGAATGCTTTTTCACTGTACCATGGGCTTGAAGTTGGAAATTTTTTGGTATTCAATTACATCGGGGGATCACACTTTGTTGTTAAGATCTATGATAAATCTGGGTGTGAAATGATTGATTTTCCCAAAAAACGAAATCAGAAGAAACGATGTAGAAGCAGAACAAAAGTTGATGTTAGAGATGACATGTTAAATATTAGGCAAGGTTTATGCCTTTCCGAGGGTCGAGGCTCAAAGGAAAATGTAAGGGAAGAGGGGGACTCATTTGAACAAGCAATGAACTTTAGTGCCACAAAAGTGAAAAGAAAAAGGCCAAGAAGACATTCTCCAACGGAAAATGCAAAAGGGAGAAAGAAGGTGGTTTGTGAAGAACTAGAAGAGGAAGAAGTGTGCGAAAAAGAATACGTAAACCCCAGAGAGGGTGGGTTAGATAAGCTCACTGATTTTTGGGATGCGAAAATTTCCGAAAGATTTTCAAACTATTTCAAAAAGAGATCAATTGCTACTGGTAGGATTGTAGACTTTAAGAAACTTGATGAAGTAAGTTGTAACATCGAGAAATTTTTTGATGATGTGCATTGGAGCCCCTTGCTAAAAGTAAAGGAAGTTGTTTTTGAAGATCTGGTGAGAAAATTTTATGCCAACCTAAGAGTTCTAAGAGATGGTTATGCATTAGAGTCTCTAGTTAATGGAAAGAAAATTGTGTTGGGCGAACAAAATTTGGCTAAGATCTTAGGTATCCCTGCTGGAGGCTCATCGAATTTTTTTAAGAGCACTTGGATAAAGGATTTTCCTTTGTCATATGAGCAAGTAAGACAGCAGTTGGTGGAGAGACATGACTTGCTGCAACCAAGAAAGTTCAATGCATTGGCTCTCAACTTTGAACACAGGGTAATGGCTCACATTATAGCCACATGTGTCATGCCAAGAGTTAGGACAACAAATTCCAATCCTACCACATCTACTACTCTTGAGCCATCTAAAGTCTCTGTAAATCAAGACATTTCTGAGCCTCCTTTTGCTTCTTCATCGAAAACTATGAGGCCTGCAATTCTTCAAGCTTTAAATGATATTAATAATTCCTTACAACAAATAACCTCCAAGCTTGATGATGACTTAACATCTGAAGAATACAGAAGTGAGAATGGTGTTTGA 1470 0.3871 MLLFSTSISFRQIWSYRCLELAIRFEASCVRWILANFRNFVFAFRLSQAGFGHKLRRDERSYLPPKFGPTASALVHKEAIIEDSNGQQCKVVVSIVDKAFAFQKGWNAFSLYHGLEVGNFLVFNYIGGSHFVVKIYDKSGCEMIDFPKKRNQKKRCRSRTKVDVRDDMLNIRQGLCLSEGRGSKENVREEGDSFEQAMNFSATKVKRKRPRRHSPTENAKGRKKVVCEELEEEEVCEKEYVNPREGGLDKLTDFWDAKISERFSNYFKKRSIATGRIVDFKKLDEVSCNIEKFFDDVHWSPLLKVKEVVFEDLVRKFYANLRVLRDGYALESLVNGKKIVLGEQNLAKILGIPAGGSSNFFKSTWIKDFPLSYEQVRQQLVERHDLLQPRKFNALALNFEHRVMAHIIATCVMPRVRTTNSNPTTSTTLEPSKVSVNQDISEPPFASSSKTMRPAILQALNDINNSLQQITSKLDDDLTSEEYRSENGV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2101 489 CDD B3_DNA 47 137 IPR003340 GO:0003677
Bisa08g2101 489 SUPERFAMILY DNA-binding pseudobarrel domain 59 141 IPR015300 -
Bisa08g2101 489 PANTHER B3 DOMAIN-CONTAINING 75 238 - -
Bisa08g2101 489 Pfam Putative plant transposon protein 298 419 IPR046796 -
Bisa08g2101 489 Pfam B3 DNA binding domain 59 138 IPR003340 GO:0003677
Bisa08g2101 489 Gene3D - 45 141 IPR015300 -
Bisa08g2101 489 MobiDBLite consensus disorder prediction 418 449 - -
Bisa08g2101 489 ProSiteProfiles B3 DNA-binding domain profile. 46 139 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2101 Bisa-ChrBisa08 50272021 50276673 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2101 63 142 B3 DNA Binding Superfamily AT5G66980 35.714 9.57e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa08g2101 B3 7.4e-10 CL0405