Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2100 ATGTATATGTTTCTGCCTCCAAAATTTGGTCCTACAGCATCAGCCTTGGTCAATAAAGAAGCCATTATTGAGGACTCAAATGAGCAGCAATGGAAGGTAGTAGTATCAATTGTTGACAAGTCTTTTGCTTTTCAGCAAGGATGGAATGCTTTTTCATTAAAGCATGGGCTTGAAGTTGGAAATTTTTTGGTATTCAATTACATCAGAGGATCACACTTTGTTGTTAAGATCTACGATAAATCTGGGTGCGGAAAGATTGATTTTTCCAAAAAACGAAATCAGAAGAAAAGATGTAGGAGCAAAACAAAAATTGATGTTATAGATGACATGTTAAATAAGCAAGGTTCATACCCTGAGTCAAACGTTGAAAACACACAAAGCCAGAGCGTTGTGTTTGTGGGAGAAATAGAAGAAAGCAAGTCCTCAACTAAAATGAAATCTGCTTCAGAGGGTCGTGGATCAAAGGAAAATGTAAGAGAAGAAGAGGATGATTCATTCGAACAACCAATAAACTTTAGTGCAACCAAACAGAAAAGAAAAAGATTGAGCAAGCATCCTCCAACTGAAAAAGCAAAAGGGAGAAACAAGAAGGTACTTTGTGAAGAACTAGAAGACAAAGAGGAAGAAGTGGATGGAAAAGAATATGCAAACCCAAAAGATAATCAGTTAGGTATGCCCATTGATTTTTGGGATGCAGAAACTGCATTAAGATTTTCAAAATATTTCAAAAAGAGACCAATTGCTACGGGTAGGATAGTAGACTTTAACAAGCTTGATGAAGTAGGCAGTAAAATTGAGAAATTTTTTGATGATGTGCATTGGAGCCCCTTGCTAAAAGTAAAAGAAGTTGTTTTTGAAGATTTGGTGAGAAAGTTTTATGCCAACCTCAGGGTAAAAGAACAGTTGGTGGAGAAACATGATTTGCTGCAGCCAAGAAAGTTTAATGCCTTCGCTCTCAACTTGGAATATAGGGTAATGGCTCACATTATAGCCACATGTGTCATGCCAAGAGTTAGGTCTCTGGAAGTGTTAAACAAAAGAGAAACATGTATCCTTTATTGCTTGGTGAACAAGATTCCTATCAACCTACCTTTGTGGATTATCAAATACATGGTAGAGAGTGGAAGGAGCAATGAGCTTGCTGCAAGTCTACCCTATGGAATGCTATTAACAAAGATTTTTAGGGCAAGTAAGGTAAATCTTACTAAATGCTTATTCAAGGAAGTGGAATCAAGATATGATGCAACATCTCTAAAGTTTATGAAGTGCAAACAAAAGCCAAGAAATTCCAATCCATCTACATTGAATGCTCTTGTGCTAAGTCTTTATAAACCAAGACATTTCTAA 1347 0.3653 MYMFLPPKFGPTASALVNKEAIIEDSNEQQWKVVVSIVDKSFAFQQGWNAFSLKHGLEVGNFLVFNYIRGSHFVVKIYDKSGCGKIDFSKKRNQKKRCRSKTKIDVIDDMLNKQGSYPESNVENTQSQSVVFVGEIEESKSSTKMKSASEGRGSKENVREEEDDSFEQPINFSATKQKRKRLSKHPPTEKAKGRNKKVLCEELEDKEEEVDGKEYANPKDNQLGMPIDFWDAETALRFSKYFKKRPIATGRIVDFNKLDEVGSKIEKFFDDVHWSPLLKVKEVVFEDLVRKFYANLRVKEQLVEKHDLLQPRKFNAFALNLEYRVMAHIIATCVMPRVRSLEVLNKRETCILYCLVNKIPINLPLWIIKYMVESGRSNELAASLPYGMLLTKIFRASKVNLTKCLFKEVESRYDATSLKFMKCKQKPRNSNPSTLNALVLSLYKPRHF 448
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2100 448 ProSiteProfiles B3 DNA-binding domain profile. 1 81 IPR003340 GO:0003677
Bisa08g2100 448 Pfam Putative plant transposon protein 312 399 IPR046796 -
Bisa08g2100 448 MobiDBLite consensus disorder prediction 141 196 - -
Bisa08g2100 448 PANTHER B3 DOMAIN-CONTAINING 18 204 - -
Bisa08g2100 448 CDD B3_DNA 3 79 IPR003340 GO:0003677
Bisa08g2100 448 Gene3D - 1 83 IPR015300 -
Bisa08g2100 448 SUPERFAMILY DNA-binding pseudobarrel domain 2 83 IPR015300 -
Bisa08g2100 448 MobiDBLite consensus disorder prediction 141 166 - -
Bisa08g2100 448 Pfam B3 DNA binding domain 3 80 IPR003340 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa08g2100 Bisa-ChrBisa08 50261433 50262938 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2100 3 85 B3 DNA Binding Superfamily AT5G66980 33.333 1.24e-07 51.6
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa08g2100 B3 3.9e-11 CL0405