Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2094 ATGGGGTCTTCTGAATCTCACCCAACTGCAATTTCGAATACCGACAAGAATCCAGAATCGGGCTTTCGGTCTCCACCATCTATTCCTATTCCCGATCACGATTCTGAACCCTCGGATCTTAATCACGCTGAAGCTGAGGCCGATGCACTTCATGGCGAGGTTCAGAACAAGCTGGTTTTGAAGGATAAGGATGGAGGGGGTGAGGCTGTGAGAAGCGATTATAAATTGGATGGGGGTGAAGAAATATGTAATAAAGCTGGTGCTGAGGAATCTGATAAGGGAGATGGGTGGGGTGAAGATAACTGGGATTGGAATGGAAATGAGGACAATAATTGGAACGAGAATGTGAACGACAGTGAGAATGATAAGGTAGGTGAAGATTTTAATGCAACTGTAGATGAAAAGGATAGGAAGGAAGAGAGAAGCAGTGGTAAAAGCCACCAGTACCCGATGAGGCCCGAAGCAGAAGATTGTGCATTCTATCTGAAGACTGGTACTTGCAAGTTTGGATTCTATTGCAAGTTTAATCACCCTGTCGGGAGGAAAAATCAGGCTGGTAAGGAGAAGGCAGGAGAGAAAGAAGAATCAGCAGATAGATTAGGGCAGACAGAATGCAAGTATTATTCAACATCAGGAGGTTGTAAGTTCGGAAAAGCTTGTAAATATAACCACACAAGAGGAAAATGTTCAGCGGCCCCAATTCTAGAGCTTAACTTTCTTGGTCTTCCTATTCGACTGGGAGAGAAAGAATGCCCTTATTACATGCGTACTGGCTCCTGTAAGTTTGGGACAAACTGCAAATTTAATCATCCAGATCCCACGGCTGTTGGAGTGGGTGATACGCCTTCAGGATATGGTAACGGTGGGTCTATATCATTACAAGGTGTTTCACAGCCATCTGTACCCCCCTGGCCTTCTCCAAGAACATTAAATGAAACTGCTGCCTTTATGCCAATGATGCTTTCACCTACTCAGGGGGTTTCTCCACAAAGTTCTGAATGGAATGCATATCAGGCACCTATCTATCTACCAGAGAGGAGTATGCATCCACCACCTGCATATGTCATGAACAACCCAGCCATTGAAACAAATGTTTATATGCACCGTCAAAAGCAGATGCAGGGTGAAGAGTTTCCCGAGAGGCCTGGGGAACCTGAATGTAGTTACTTCTTAAAAACTGGGGATTGCAAGTTCAAGTCTAATTGTAAATTTCACCATCCACGGAATCGGATTGCAAAGCTACCTTCAACATGCACCCTCAATGACAAGGGTCTTCCTTTGAGACCTGACCAGAATGTCTGCACACATTACAGTCGTTACGGGATATGCAAATTTGGACCAGCTTGTAAGTTTGATCACCCAATTAATTCATCGCCCTCAACTATGCCTGCACTAGATCAGCAATCCTACCCTGCCAATGTAGAAGTGGCTGGAAATGGAGGGGCAACTGGACAAGTGATGCAATAA 1467 0.4479 MGSSESHPTAISNTDKNPESGFRSPPSIPIPDHDSEPSDLNHAEAEADALHGEVQNKLVLKDKDGGGEAVRSDYKLDGGEEICNKAGAEESDKGDGWGEDNWDWNGNEDNNWNENVNDSENDKVGEDFNATVDEKDRKEERSSGKSHQYPMRPEAEDCAFYLKTGTCKFGFYCKFNHPVGRKNQAGKEKAGEKEESADRLGQTECKYYSTSGGCKFGKACKYNHTRGKCSAAPILELNFLGLPIRLGEKECPYYMRTGSCKFGTNCKFNHPDPTAVGVGDTPSGYGNGGSISLQGVSQPSVPPWPSPRTLNETAAFMPMMLSPTQGVSPQSSEWNAYQAPIYLPERSMHPPPAYVMNNPAIETNVYMHRQKQMQGEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPRNRIAKLPSTCTLNDKGLPLRPDQNVCTHYSRYGICKFGPACKFDHPINSSPSTMPALDQQSYPANVEVAGNGGATGQVMQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2094 488 SMART c3hfinal6 245 272 IPR000571 GO:0046872
Bisa08g2094 488 SMART c3hfinal6 152 179 IPR000571 GO:0046872
Bisa08g2094 488 SMART c3hfinal6 381 408 IPR000571 GO:0046872
Bisa08g2094 488 SMART c3hfinal6 199 226 IPR000571 GO:0046872
Bisa08g2094 488 SMART c3hfinal6 428 455 IPR000571 GO:0046872
Bisa08g2094 488 MobiDBLite consensus disorder prediction 35 99 - -
Bisa08g2094 488 ProSiteProfiles Zinc finger C3H1-type profile. 152 180 IPR000571 GO:0046872
Bisa08g2094 488 ProSiteProfiles Zinc finger C3H1-type profile. 199 227 IPR000571 GO:0046872
Bisa08g2094 488 ProSiteProfiles Zinc finger C3H1-type profile. 245 273 IPR000571 GO:0046872
Bisa08g2094 488 SUPERFAMILY CCCH zinc finger 150 180 IPR036855 GO:0046872
Bisa08g2094 488 ProSiteProfiles Zinc finger C3H1-type profile. 428 456 IPR000571 GO:0046872
Bisa08g2094 488 Gene3D - 118 188 - -
Bisa08g2094 488 Gene3D - 336 416 - -
Bisa08g2094 488 MobiDBLite consensus disorder prediction 119 149 - -
Bisa08g2094 488 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 202 224 IPR000571 GO:0046872
Bisa08g2094 488 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 248 271 IPR000571 GO:0046872
Bisa08g2094 488 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 156 178 IPR000571 GO:0046872
Bisa08g2094 488 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 383 408 IPR000571 GO:0046872
Bisa08g2094 488 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 431 454 IPR000571 GO:0046872
Bisa08g2094 488 SUPERFAMILY CCCH zinc finger 386 411 IPR036855 GO:0046872
Bisa08g2094 488 MobiDBLite consensus disorder prediction 1 21 - -
Bisa08g2094 488 MobiDBLite consensus disorder prediction 1 149 - -
Bisa08g2094 488 PANTHER PROTEIN PHOSPHATASE RELATED 91 459 - -
Bisa08g2094 488 Gene3D - 195 279 - -
Bisa08g2094 488 Gene3D - 427 473 - -
Bisa08g2094 488 SUPERFAMILY CCCH zinc finger 426 454 IPR036855 GO:0046872
Bisa08g2094 488 ProSiteProfiles Zinc finger C3H1-type profile. 381 409 IPR000571 GO:0046872
Bisa08g2094 488 MobiDBLite consensus disorder prediction 104 118 - -
Bisa08g2094 488 SUPERFAMILY CCCH zinc finger 246 272 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2094 Bisa-ChrBisa08 50093868 50100147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2094 373 458 C2H2 Transcription Factor Family AT3G02830 45.977 7.32e-18 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa08g2094 zf-CCCH 1.9e-08 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2094 08 50093868 50100147 Bisa08g2094 08 50093868 50100147 ECH