Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa08g2094 | ATGGGGTCTTCTGAATCTCACCCAACTGCAATTTCGAATACCGACAAGAATCCAGAATCGGGCTTTCGGTCTCCACCATCTATTCCTATTCCCGATCACGATTCTGAACCCTCGGATCTTAATCACGCTGAAGCTGAGGCCGATGCACTTCATGGCGAGGTTCAGAACAAGCTGGTTTTGAAGGATAAGGATGGAGGGGGTGAGGCTGTGAGAAGCGATTATAAATTGGATGGGGGTGAAGAAATATGTAATAAAGCTGGTGCTGAGGAATCTGATAAGGGAGATGGGTGGGGTGAAGATAACTGGGATTGGAATGGAAATGAGGACAATAATTGGAACGAGAATGTGAACGACAGTGAGAATGATAAGGTAGGTGAAGATTTTAATGCAACTGTAGATGAAAAGGATAGGAAGGAAGAGAGAAGCAGTGGTAAAAGCCACCAGTACCCGATGAGGCCCGAAGCAGAAGATTGTGCATTCTATCTGAAGACTGGTACTTGCAAGTTTGGATTCTATTGCAAGTTTAATCACCCTGTCGGGAGGAAAAATCAGGCTGGTAAGGAGAAGGCAGGAGAGAAAGAAGAATCAGCAGATAGATTAGGGCAGACAGAATGCAAGTATTATTCAACATCAGGAGGTTGTAAGTTCGGAAAAGCTTGTAAATATAACCACACAAGAGGAAAATGTTCAGCGGCCCCAATTCTAGAGCTTAACTTTCTTGGTCTTCCTATTCGACTGGGAGAGAAAGAATGCCCTTATTACATGCGTACTGGCTCCTGTAAGTTTGGGACAAACTGCAAATTTAATCATCCAGATCCCACGGCTGTTGGAGTGGGTGATACGCCTTCAGGATATGGTAACGGTGGGTCTATATCATTACAAGGTGTTTCACAGCCATCTGTACCCCCCTGGCCTTCTCCAAGAACATTAAATGAAACTGCTGCCTTTATGCCAATGATGCTTTCACCTACTCAGGGGGTTTCTCCACAAAGTTCTGAATGGAATGCATATCAGGCACCTATCTATCTACCAGAGAGGAGTATGCATCCACCACCTGCATATGTCATGAACAACCCAGCCATTGAAACAAATGTTTATATGCACCGTCAAAAGCAGATGCAGGGTGAAGAGTTTCCCGAGAGGCCTGGGGAACCTGAATGTAGTTACTTCTTAAAAACTGGGGATTGCAAGTTCAAGTCTAATTGTAAATTTCACCATCCACGGAATCGGATTGCAAAGCTACCTTCAACATGCACCCTCAATGACAAGGGTCTTCCTTTGAGACCTGACCAGAATGTCTGCACACATTACAGTCGTTACGGGATATGCAAATTTGGACCAGCTTGTAAGTTTGATCACCCAATTAATTCATCGCCCTCAACTATGCCTGCACTAGATCAGCAATCCTACCCTGCCAATGTAGAAGTGGCTGGAAATGGAGGGGCAACTGGACAAGTGATGCAATAA | 1467 | 0.4479 | MGSSESHPTAISNTDKNPESGFRSPPSIPIPDHDSEPSDLNHAEAEADALHGEVQNKLVLKDKDGGGEAVRSDYKLDGGEEICNKAGAEESDKGDGWGEDNWDWNGNEDNNWNENVNDSENDKVGEDFNATVDEKDRKEERSSGKSHQYPMRPEAEDCAFYLKTGTCKFGFYCKFNHPVGRKNQAGKEKAGEKEESADRLGQTECKYYSTSGGCKFGKACKYNHTRGKCSAAPILELNFLGLPIRLGEKECPYYMRTGSCKFGTNCKFNHPDPTAVGVGDTPSGYGNGGSISLQGVSQPSVPPWPSPRTLNETAAFMPMMLSPTQGVSPQSSEWNAYQAPIYLPERSMHPPPAYVMNNPAIETNVYMHRQKQMQGEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPRNRIAKLPSTCTLNDKGLPLRPDQNVCTHYSRYGICKFGPACKFDHPINSSPSTMPALDQQSYPANVEVAGNGGATGQVMQ | 488 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa08g2094 | 488 | SMART | c3hfinal6 | 245 | 272 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | SMART | c3hfinal6 | 152 | 179 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | SMART | c3hfinal6 | 381 | 408 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | SMART | c3hfinal6 | 199 | 226 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | SMART | c3hfinal6 | 428 | 455 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | MobiDBLite | consensus disorder prediction | 35 | 99 | - | - | |
Bisa08g2094 | 488 | ProSiteProfiles | Zinc finger C3H1-type profile. | 152 | 180 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | ProSiteProfiles | Zinc finger C3H1-type profile. | 199 | 227 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | ProSiteProfiles | Zinc finger C3H1-type profile. | 245 | 273 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | SUPERFAMILY | CCCH zinc finger | 150 | 180 | IPR036855 | GO:0046872 | |
Bisa08g2094 | 488 | ProSiteProfiles | Zinc finger C3H1-type profile. | 428 | 456 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | Gene3D | - | 118 | 188 | - | - | |
Bisa08g2094 | 488 | Gene3D | - | 336 | 416 | - | - | |
Bisa08g2094 | 488 | MobiDBLite | consensus disorder prediction | 119 | 149 | - | - | |
Bisa08g2094 | 488 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 202 | 224 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 248 | 271 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 156 | 178 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 383 | 408 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 431 | 454 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | SUPERFAMILY | CCCH zinc finger | 386 | 411 | IPR036855 | GO:0046872 | |
Bisa08g2094 | 488 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bisa08g2094 | 488 | MobiDBLite | consensus disorder prediction | 1 | 149 | - | - | |
Bisa08g2094 | 488 | PANTHER | PROTEIN PHOSPHATASE RELATED | 91 | 459 | - | - | |
Bisa08g2094 | 488 | Gene3D | - | 195 | 279 | - | - | |
Bisa08g2094 | 488 | Gene3D | - | 427 | 473 | - | - | |
Bisa08g2094 | 488 | SUPERFAMILY | CCCH zinc finger | 426 | 454 | IPR036855 | GO:0046872 | |
Bisa08g2094 | 488 | ProSiteProfiles | Zinc finger C3H1-type profile. | 381 | 409 | IPR000571 | GO:0046872 | |
Bisa08g2094 | 488 | MobiDBLite | consensus disorder prediction | 104 | 118 | - | - | |
Bisa08g2094 | 488 | SUPERFAMILY | CCCH zinc finger | 246 | 272 | IPR036855 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa08g2094 | Bisa-ChrBisa08 | 50093868 | 50100147 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa08g2094 | 373 | 458 | C2H2 Transcription Factor Family | AT3G02830 | 45.977 | 7.32e-18 | 83.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Bisa08g2094 | zf-CCCH | 1.9e-08 | CL0537 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bisa08g2094 | 08 | 50093868 | 50100147 | Bisa08g2094 | 08 | 50093868 | 50100147 | ECH |