Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2091 ATGGCAAGTTCGGCAGCTCTGGCATCAGAGCCAAACGCAGAGGTATTTTCATGGCTGAAATCTCTTCCTCTGGCTCCAGAGTACCGCCCTACTCTGGCTGAGTTCCAAGATCCGATTTCATACATTTTTAAGATCGAGAAGGAAGCTTCTAAGTATGGAATCTGCAAAATTGTTCCCCCTGTGCCCCCTTCTTCAAAAAAGACAGCAATTGCGAATCTTAATCGCTCGTTGGCGGCACGAGCTGCTTCCTCTGACTCTTCTAACTCAAAATCTCAGCCTACATTCACCACAAGGCAAGAGCAGATCGGGTTCTGCCCTCGGAAGCAACGGCCCGTGCAGCGTCCTGTGTGGCAGAGTGGTGAGTACTACACGTTTCAGGAATTTGAAGCGAAGGCCAAGGCTTTTGAGAAGAATTATCTGAAGAAATATGTTAAGAAAGGTGGGCTCTCACCTCTGGAGATAGAAACACTTTATTGGAAGGCGACAGTGGACAAACCCTTTTCGGTGGAGTACGCAAATGATATGCCTGGTTCGGCTTTTGTTCCCTTGAATGGTAGAAAATGCAGAGAGGCAGGGGAAGGTGTGACTCTTGGTGAGACTGCATGGAACATGAGGGGGGTGTCACGGGCAAATGGCTCTTTGTTGAGGTTTATGAAGGAGGAGATTCCTGGTGTTACATCACCGATGGTGTATGTAGCTATGCTATTCAGCTGGTTTGCGTGGCATGTAGAGGATCATGACTTGCACAGCTTGAATTACCTCCATATGGGGGCAGGCAAGACGTGGTATGGCGTGCCGCGGGATGCAGCGGTTGCATTCGAGGAAGTGGTCAGAGTTCATGGTTATGGAGGAGAAATAAACCCTCTTGTTACTTTTGCTATACTTGGTGAGAAAACCACAGTGATGTCACCTGAAGTATTTATTAGCTCGGGGGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTCACATTTCCAAGAGCCTACCATACTGGGTTTAGTCATGGATTTAATTGTGGGGAGGCAGCTAACATTGCGACACCTGAATGGTTGAGGGTTGCTAAAGACGCTGCTATTCGGAGGGCTTCAATAAATTATCCTCCCATGGTTTCACATTTCCAGTTACTTTATGATCATGCTCTCGCATTGTGCTCAAGAATTCCTGGGGGCATCTGTGCTGAACCACGGAGTTCTCGACTTAAAGATAAGAGGAAGAGTGAAGGGGAAACTGTAATTAAAGAATTATTTGTCCAGGATGTGTTACAGAACAATGATCTGCTTCATGGGCTTGGAAAAGGAACTGCTATAGTACTTCTTCCTCGCAGCTCTTCGGATATTTCTGTTTGTTCAAAATTACGTGTTGGATCGCAACAACTGAAGGTGAACCCGGGGTATTCCTTCAGTGCATGTAACTCTGGGGGAATGAATTCCTCAAAAGGTTTTGTTTCTGATGACCTAGTGTTCAGTAGGAATCACGGCATCAAGCAAGTGAAAGGTTTTTATTCAGTAAAAGAGAAGTTTGCTTCGTTGTGTGAAAGGAACAGGGTTTCCTCATTAAGTGTAAATGATAACACATGCTCTTCAAGTTCTAAGCCCATTCAGAGAGACACTGAAGGGGAAACAACTCAGGGGGATGGATTGTCAGATCAGAGACTATTTTCATGTGTCACATGTGGAATATTAAGCTTTGCTTGTGTTGCTATTGTACAGCCTAGGGAACCAGCAGCCAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAATAAGTAGCAATAAATTTACTATTGCCCAAGGAGATGCAGCTATTTCTGAGAAAAACACCTTCACAGGATGGAAGGTAAAGAATGCCCCAGATAGTTTATATGATGTTCCAGTTCAATCTGTTCAGTACCAAATACAGAATGAGGATCGATCTTATGAGGAGGCTTTGCATGCTAAAAGACAAAAGGACAATTCAGCACTTGACTTATTGGCATCAGCATATGCAAATTCATCTGATTCGGAGGAAGAACAGGTTGACCCAGATATTGCAGTTGACAATCACGAATCAAATGTAGCAAACCATCCATCAGGAAGTATGTCTCAGAAGGAGATATCTTGTATGCCTTCTGATTTCCAAGATTGCAATGCAAGTACAGTCAGGGTCCAAGAAGATTATATGCAAAGATCCAAGTCTGAAGGTTATGATAGCACTTCAGGGACGGCATTTAAAAATACAAAGGCAGTGCCTCATTGTACCTTAAACTATTCTGGAGATGTTCATGATGCTAAAACATCAATGTTTGACAATGCTGTAGTTCCCATTGATAATAAGGGGGATTCATTGTTGCCACAATCTGATGAAGACTCATCTAGATTGCATGTCTTCTGTCTGGAACATGCTGCAGAAGTGGAGCAGCAGCTTCGGCCAATAGGAGGAGCTCACATATTGCTCCTATGTCATCCAGATTATCCCAAGGTAGAGGCTCAAGCAAAGTGTGTGGGAGCAGAACTGGGGATTGATAACATGTGGAAGAACCTTGCATACAGACATGCCACCAAAGAAGATGAGGAGAGGATCCAGTCAGCTCTGGATAGTGAGGATGCTATTCCTGGAAATGCGGACTGGGCTGTGAAGCTGGGAATCAATCTCTTTTATAGTGCCAATCTTAGCCGCTCTCCTCTCTACAGTAAGCAGATGCCTTATAATTCTGTTATATATTTTGCATTTGGCCGTAGTTCTCCAGCAAACTCACCCTTAGAGCCCAAGGTCTATCAAAGAAGGTCAAGCAAGCAGAAAAAGGTAGTTGCTGGCAAATGGTGTGGTAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTTTAACTAAAAGAGATTCTGAAGATGTTGATGAGAAAAGCTTACATGGGTGGTCATTGCCAGACCAGAAAATTGAGAGATCAGAAAGTGCCCACAAAACCAATTCCACTATGAGAAAATCTGGTAGGAAAAGGAAAATGACTGCAGAGAGCAGAGGAGCCAGGAAAGGCAGTTTCTGTGAGAGAGACTTTGTAGTTTCAGATAGTTCAATTGAAGATAAATACAATCAACAGCAGAGGAAAATTCCTAGAAGCAAGCAAGCTAGGTACTTTGAGAGAGATGATGCAGCTTTGGAAGGGGATCATTCTCCTCTGCAGCACTATGTAAAACCTTTAAGCAAGCGATCAAAAAGCATTGAAAGTGATGCAGTTTCAGATGATTCACTGGATGATAATTCTCATATGCAGCAAGGGAGGAATATCAAAATAAAAGAACCAAAATTTATTGACAGTGATGTGGTTTCAGATGATACAATGGGTTATGATTCTGACTGGCTACTGAGGGGAGAGCACAGCAGCAAGAAAATGCAAGACTCAGAGGGAGATGCAGTTTCAGAGGATTCAATGGATGGTGATTCTCTTCAGGAGCATAGAAAGAGTTATAAAAGCAAGCAAGCCAAATGCATTGCTGGAGAAGATGTAATTTCTGATGACCAAATGGAGGATCATTTTCAAAAGCAGCAAAGGAGGATTCCTAAAAGCAGGCAAGCTGCCAAATATTTTGGTGGAGAAGATATTATGGTATCAGATGACCAACTGGAGCATCATATGCAGAAGCAGCAGCAAAGGATCCCTAAAGGCAGGCAAGCCAAATATCTCGCTAGAGAGGATATTACATCTGATGACCAAATGGAGGTTCACTCTCACAAGTATCATAGAAGGATTCCTAAAAGCAGGCAAGCCAAATGCCTAGTTGAGGAACATGTAGTGTCTGATGACCAAGTGGAGGAGCACTTTCAGAAGCCACGAAGCAGTGTTCCAAGGAGCAGAAAAAATAAACGCAAGGATAAACTTGCAGTTGATTCAACTGAAGATCATTCTTATCTGCTGCATCAAACTCCTAAAAGAAAGCAAGCTAGAAGCATGGATGAAGACAATTCAAATTCAGATGATCAAATGGAGGATTCATCTCATCAGCAGCAAAGGAGGATTCTTCGAAGCCAGCAATCTAGATCAAAGACACATCAAGAAATGAAACAATCAAAGCCACGCAGTGTGAAAAGGCGGACATCCCAGCCTATAAAACGAGGTGCTCAGTCGCTAATGACACTAAAGGCTTCTCAAAAAATGAAGCAGCCTCCTCGACTGCAGAAAAATCAATCTAGTAACTCCAGAGAGTTTAATTTATCTATTGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGTCCCAAAAGTTGACGAGTCTGAAGCAAAACCGAAGGAGAAGCAAAACAGGAAAAAGGTGAAAACAGCAGTTAAAGTTTCAGCTGGCCTTGCCAAAATGAAGGATGAGGAAGCAGAATACCAGTGTGACATTGAGGGGTGCACTATGAGTTTTGGCTCAAAACAGGAGCTAGCGGTGCATAAGAAAAACATCTGTCCTGTAAAGGGGTGTGAAAAGAAATTTTTCTCACATAAATATCTGGTGCAGCACCGTCGAGTTCACGTGGATGACCGCCCTCTGAGGTGCCCTTGGAAGGGCTGCAAGATGACCTTCAAGTGGGCATGGGCCCGCACGGAGCATATTCGAGTTCACACAGGAGCTCGTCCTTATGTTTGTGCTGAGCCAGGGTGTGGGCAAACATTCAGATTTGTGTCTGACTTCAGTCGCCATAAGCGAAAGACGGGTCATTCAGCGAAGAAGAGTCGTCATTAG 4737 0.438 MASSAALASEPNAEVFSWLKSLPLAPEYRPTLAEFQDPISYIFKIEKEASKYGICKIVPPVPPSSKKTAIANLNRSLAARAASSDSSNSKSQPTFTTRQEQIGFCPRKQRPVQRPVWQSGEYYTFQEFEAKAKAFEKNYLKKYVKKGGLSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPLNGRKCREAGEGVTLGETAWNMRGVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFAILGEKTTVMSPEVFISSGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDHALALCSRIPGGICAEPRSSRLKDKRKSEGETVIKELFVQDVLQNNDLLHGLGKGTAIVLLPRSSSDISVCSKLRVGSQQLKVNPGYSFSACNSGGMNSSKGFVSDDLVFSRNHGIKQVKGFYSVKEKFASLCERNRVSSLSVNDNTCSSSSKPIQRDTEGETTQGDGLSDQRLFSCVTCGILSFACVAIVQPREPAARYLMSADCSFFNDWVVGSGISSNKFTIAQGDAAISEKNTFTGWKVKNAPDSLYDVPVQSVQYQIQNEDRSYEEALHAKRQKDNSALDLLASAYANSSDSEEEQVDPDIAVDNHESNVANHPSGSMSQKEISCMPSDFQDCNASTVRVQEDYMQRSKSEGYDSTSGTAFKNTKAVPHCTLNYSGDVHDAKTSMFDNAVVPIDNKGDSLLPQSDEDSSRLHVFCLEHAAEVEQQLRPIGGAHILLLCHPDYPKVEAQAKCVGAELGIDNMWKNLAYRHATKEDEERIQSALDSEDAIPGNADWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYFAFGRSSPANSPLEPKVYQRRSSKQKKVVAGKWCGKVWMSNQVHPLLTKRDSEDVDEKSLHGWSLPDQKIERSESAHKTNSTMRKSGRKRKMTAESRGARKGSFCERDFVVSDSSIEDKYNQQQRKIPRSKQARYFERDDAALEGDHSPLQHYVKPLSKRSKSIESDAVSDDSLDDNSHMQQGRNIKIKEPKFIDSDVVSDDTMGYDSDWLLRGEHSSKKMQDSEGDAVSEDSMDGDSLQEHRKSYKSKQAKCIAGEDVISDDQMEDHFQKQQRRIPKSRQAAKYFGGEDIMVSDDQLEHHMQKQQQRIPKGRQAKYLAREDITSDDQMEVHSHKYHRRIPKSRQAKCLVEEHVVSDDQVEEHFQKPRSSVPRSRKNKRKDKLAVDSTEDHSYLLHQTPKRKQARSMDEDNSNSDDQMEDSSHQQQRRILRSQQSRSKTHQEMKQSKPRSVKRRTSQPIKRGAQSLMTLKASQKMKQPPRLQKNQSSNSREFNLSIEEEEEGGPSTRLRKRVPKVDESEAKPKEKQNRKKVKTAVKVSAGLAKMKDEEAEYQCDIEGCTMSFGSKQELAVHKKNICPVKGCEKKFFSHKYLVQHRRVHVDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSRH 1578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2091 1578 ProSiteProfiles Zinc finger C2H2 type domain profile. 1485 1514 IPR013087 -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1404 1437 - -
Bisa08g2091 1578 ProSitePatterns Zinc finger C2H2 type domain signature. 1517 1539 IPR013087 -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1211 1443 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1290 1337 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1225 1245 - -
Bisa08g2091 1578 FunFam Probable lysine-specific demethylase ELF6 18 369 - -
Bisa08g2091 1578 FunFam Probable lysine-specific demethylase ELF6 1512 1541 - -
Bisa08g2091 1578 Pfam jmjN domain 26 59 IPR003349 -
Bisa08g2091 1578 SUPERFAMILY Clavaminate synthase-like 211 377 - -
Bisa08g2091 1578 SMART cupin_9 196 365 IPR003347 -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1346 1360 - -
Bisa08g2091 1578 SUPERFAMILY beta-beta-alpha zinc fingers 1485 1522 IPR036236 -
Bisa08g2091 1578 ProSitePatterns Zinc finger C2H2 type domain signature. 1487 1509 IPR013087 -
Bisa08g2091 1578 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 1511 - -
Bisa08g2091 1578 SMART c2h2final6 1515 1539 IPR013087 -
Bisa08g2091 1578 SMART c2h2final6 1485 1509 IPR013087 -
Bisa08g2091 1578 SMART c2h2final6 1462 1484 IPR013087 -
Bisa08g2091 1578 SMART c2h2final6 1545 1571 IPR013087 -
Bisa08g2091 1578 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1255 1280 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1128 1160 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 523 548 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1146 1160 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 81 103 - -
Bisa08g2091 1578 ProSitePatterns Zinc finger C2H2 type domain signature. 1547 1571 IPR013087 -
Bisa08g2091 1578 ProSiteProfiles JmjC domain profile. 199 365 IPR003347 -
Bisa08g2091 1578 ProSiteProfiles Zinc finger C2H2 type domain profile. 1545 1576 IPR013087 -
Bisa08g2091 1578 FunFam Probable lysine-specific demethylase ELF6 1542 1571 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 970 1011 - -
Bisa08g2091 1578 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Bisa08g2091 1578 Gene3D Cupin 18 369 - -
Bisa08g2091 1578 SUPERFAMILY beta-beta-alpha zinc fingers 1525 1569 IPR036236 -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 970 992 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1067 1090 - -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1368 1403 - -
Bisa08g2091 1578 SMART JmjN_1 24 65 IPR003349 -
Bisa08g2091 1578 MobiDBLite consensus disorder prediction 1069 1090 - -
Bisa08g2091 1578 Gene3D Classic Zinc Finger 1483 1569 - -
Bisa08g2091 1578 ProSiteProfiles Zinc finger C2H2 type domain profile. 1515 1544 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2091 Bisa-ChrBisa08 50067431 50075909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2091 1191 1576 C2H2 Transcription Factor Family AT3G48430 41.278 1.82e-66 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa08g2091 JmjC 1.7e-35 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2091 08 50067431 50075909 Bisa08g2091 08 50067431 50075909 ECH