Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2087 ATGCCACGTGTACACTGCAAGCATTATGAGGCCCAAACCCAAAACGTTGCCAATGGTGACGTGCACACATCCGGGCCAAGCACAGAAGAATCAGATTCAGATTTGCATTTGATAATCGTCAACCGCTCTCGCAGACAGGTTTGGATTTTTTCTCCCCTAGAAATGGCATCGAGCGAGGGATTTCTGACAGAGGAGCAGAGGGAAATTCTAAAAATTGCCAGTCATAATGTGGAAAATTTATCTTCATCTCCAAAATCTCCCTCATCATTGGTTGCTGAACATCATATAAAAGCACCTGCTGGAAGTAAGGCACAAACTTCTGGGATTGCTGTGAGGCACGTGCGACGGTCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGATAGAAATGACCCAAACTATGACAGTGGTGAGGAACCCTATCAGCTGGTTGGGTCTACTGTTACTGATCCCTTAGATGAATTCAAGAAGGCATTTGTATCCACCATTGAGGAATATTTCAGCACTGGTGATGTGGAATTAGCTGCCTCTGACCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGACTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCGGTTCTGCTTTCAGCTTTGTATGCAGATGTACTCAGTCCCTCACAGATTAGGGATGGATTTTTTATGCTTCTTGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCCGTTGACATCCTAGCTTTATTTCTGGCTCGGGCTGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCAAAAAAGGCACTTCCTGAATCTTCCAAAGGGGTTCAGGTTATCCAGACTGCCGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAACTTGTGGAGAGGCGGTGGGGTGGTAGCACTCATATCACTGTTGAAGAAGTGAAGAAGAAGATTTCTGATTTATTGAGAGAATACGTTGAAAGTGGTGACACAGTTGAAGCCTGTCGATGTATACGTGAGTTGGGAGTTTCATTCTTCCATCATGAGGTTGTGAAGAGGGCTCTGGTACTTGCCATGGAGATCCGTTCAGCAGAACTTTTGATGTTGAAGTTACTAAAAGAAGCAGCAGAAGAAGGACTTATTAGTTCCAGCCAAATGGTGAAAGGTTTTTCTCGTTTGGCAGAAGGCCTGGATGACCTTGCTCTTGATATTCCTTCAGCTAAAACTTTGTTTCAATCATTGGTCCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCATTTATGAAACCCTCTGGTGAAGATGGGGATATCCAAGTTGAAGATGAAAAGGTGAGGAAGTACAAAAAAGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTAATTCGGAGTCTTGAAGATCTTGGGGCACCAGAGCATAACCCAGTATTTTTGAAGAAGCTAATAACTCTTGCTATGGATAGAAAAAATAGGGAAAAAGAAATGGCATCTGTACTGCTATCTGCTCTTCATATAGAGATCTTCTCAACGGAGGATATTGTTAGTGGTTTTGTCATGCTTTTGGAAAGTGCAGAAGATACGGCACTGGATATATTGGATGCTTCGAATGAGCTTGCCCTGTTTTTAGCTCGGGCTGTGATTGATGACGTATTGGCCCCTCTGAATTTAGAAGAAATTGGCAGTAGGTTGCCTCCAAAATGCAGTGGGAGTGAAACTGTGCGCATGGCTCGGTCACTCATTGCTGCTCGCCATGCTGGTGAGAGGTTATTGAGATGTTGGGGTGGTGGGACTGGCTGGGCCGTGGAGGATGCTAAGGACAAGATCATGAAACTCCTGGAGGAGTATGAAAGTGGAGGTGTGGTGAGTGAAGCTTGCCAGTGTATCCGTGACCTTGGAATGCCTTTCTTCAACCATGAGGTGGTGAAGAAAGCTCTGGTGATGGCTATGGAGAAGAAGAATGACAGGATGCTGGATCTGCTTCAGGAATGCTTCAGTGAAGGTCTGATCACCATCAATCAGATGACCAAAGGGTTCACTCGCATTAAGGATGGTCTCGATGATCTGGCTCTGGACATCCCAAACGCAAAGGAGAAATTTGTCTTCTATGTGGAGCATGCCCTGAAGAAGGGTTGGCTTCTATCATCATTTGATTCCTCTGATGTCTAA 2265 0.4468 MPRVHCKHYEAQTQNVANGDVHTSGPSTEESDSDLHLIIVNRSRRQVWIFSPLEMASSEGFLTEEQREILKIASHNVENLSSSPKSPSSLVAEHHIKAPAGSKAQTSGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAFVSTIEEYFSTGDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVLSPSQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARAKKALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKISDLLREYVESGDTVEACRCIRELGVSFFHHEVVKRALVLAMEIRSAELLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPKAISEGWLDASFMKPSGEDGDIQVEDEKVRKYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEHNPVFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVSGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFVFYVEHALKKGWLLSSFDSSDV 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2087 754 MobiDBLite consensus disorder prediction 11 31 - -
Bisa08g2087 754 FunFam programmed cell death protein 4 167 318 - -
Bisa08g2087 754 FunFam Programmed cell death protein 4 325 460 - -
Bisa08g2087 754 SUPERFAMILY ARM repeat 173 333 IPR016024 -
Bisa08g2087 754 ProSiteProfiles MI domain profile. 473 594 IPR003891 -
Bisa08g2087 754 SUPERFAMILY ARM repeat 336 456 IPR016024 -
Bisa08g2087 754 SMART ma3_7 176 287 IPR003891 -
Bisa08g2087 754 SMART ma3_7 474 585 IPR003891 -
Bisa08g2087 754 SMART ma3_7 637 746 IPR003891 -
Bisa08g2087 754 SMART ma3_7 340 451 IPR003891 -
Bisa08g2087 754 MobiDBLite consensus disorder prediction 1 31 - -
Bisa08g2087 754 SUPERFAMILY ARM repeat 471 629 IPR016024 -
Bisa08g2087 754 FunFam programmed cell death protein 4 463 617 - -
Bisa08g2087 754 Pfam MA3 domain 176 287 IPR003891 -
Bisa08g2087 754 Pfam MA3 domain 340 451 IPR003891 -
Bisa08g2087 754 Pfam MA3 domain 638 745 IPR003891 -
Bisa08g2087 754 Pfam MA3 domain 475 584 IPR003891 -
Bisa08g2087 754 ProSiteProfiles MI domain profile. 175 296 IPR003891 -
Bisa08g2087 754 Gene3D - 168 316 - -
Bisa08g2087 754 Gene3D - 465 616 - -
Bisa08g2087 754 PANTHER PROGRAMMED CELL DEATH 4 57 750 IPR039778 GO:0045892
Bisa08g2087 754 SUPERFAMILY ARM repeat 633 749 IPR016024 -
Bisa08g2087 754 ProSiteProfiles MI domain profile. 636 754 IPR003891 -
Bisa08g2087 754 ProSiteProfiles MI domain profile. 339 460 IPR003891 -
Bisa08g2087 754 FunFam Programmed cell death protein 4 622 753 - -
Bisa08g2087 754 Gene3D - 624 751 - -
Bisa08g2087 754 Gene3D - 326 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2087 Bisa-ChrBisa08 50015158 50019543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2087 640 732 Eukaryotic Initiation Factors Gene Family AT5G57870 32.292 4.07e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2087 08 50015158 50019543 Bisa08g2087 08 50015158 50019543 ECH