Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2062 ATGGAGATGGAGCGCGTCTTTGAATTTCCTCATACTCACTTGGATCGGCGTCCGAGGAAGAGAGCGCGATTGGGCTGGGACGTCCCTGAGGCCCCAAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGGAATTTTTCAAGCTATGCACCTCCAAGGGGGACCTCAGAGCATACCACTATTTCTCTAAATGTTAAGGGAGTAGCTCGAAATTGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATCCATAGCAAAATGGGTGAAGGAACCTTTGGACAGGTCTTGGAATGCTGGGACAGGGAAAGGAAGGAGATGGTTGCCATAAAAATTGTTCGTGGGATAAAGAAGTATCGAGAAGCGGCCATGATAGAGATTGAGGTGCTGCAACAGCTTGGTAAACATGATAAAGGTGGCAATCGTTGTGTACAATTACGGAACTGGTTTGACTATCGTAACCATATCTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTACGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGTGAGATTGGCCGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGCACATGATCCATACAGATTTGAAGCCAGAAAACATACTTCTAGTTTCACCGGATTATGTTAAAATTCCTGACTACAGGAGTTCTTCCAGATCACCAACTTCTTATTTCAAGAGAGTTCCAAAGTCAAGTGCTATCAAGGTTATTGATTTTGGCAGCACGACTTATGAGCGGGAAGATCAGAATTATATTGTCTCAACTCGGCATTATAGGGCTCCTGAAGTCATACTTGGACTTGGGTGGAGTTATCCGTGTGATATATGGAGTGTGGGATGCATATTGGTGGAGTTATGCACGGGCGAAGCTTTGTTTCAGACTCATGAGAATTTGGAGCACCTTGCCATGATGGAGAGGGTGCTTGGTCCGTTACCTCAACAAATGTTGAAGAGGGCAGACCGACATGCTGAGAAGTATGTTAGAAGGGGCAGGTTAGACTGGCCGGAGGGTGCTGCTTCTAGGGATAGTATGAAAGCTGTATTGAAGCTTCCGCGGCTTCAGAACCTGGTAATGCAGCACGTAGATCATTCAGCAGGCGATCTCATACATGTCTTGCAGGGGTTGCTTAGATATGACCCTTCTGAAAGATTAACAGCTAGGGAGGCTCTGCGACATCCATTTTTCACAAGAGATCACCTTAGGAGATGA 1293 0.4493 MEMERVFEFPHTHLDRRPRKRARLGWDVPEAPKAQVGLFCGQDVGNFSSYAPPRGTSEHTTISLNVKGVARNCSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQLRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSPDYVKIPDYRSSSRSPTSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQQMLKRADRHAEKYVRRGRLDWPEGAASRDSMKAVLKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2062 430 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2062 430 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 426 - -
Bisa08g2062 430 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2062 430 SUPERFAMILY Protein kinase-like (PK-like) 85 427 IPR011009 -
Bisa08g2062 430 FunFam Serine/threonine-protein kinase AFC2 174 423 - -
Bisa08g2062 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bisa08g2062 430 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Bisa08g2062 430 CDD PKc_CLK 85 423 - -
Bisa08g2062 430 FunFam Serine/threonine-protein kinase AFC2 85 178 - -
Bisa08g2062 430 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2062 430 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2062 Bisa-ChrBisa08 49580000 49583309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2062 103 423 Core Cell Cycle Gene Families AT1G76540 25.373 3.85e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bisa08g2062 Pkinase 1.5e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2062 08 49580000 49583309 Bisa08g2062 08 49580000 49583309 ECH