Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2043 ATGGCATTGGAATTGGATCGTAACTTGCAGGTATTTGATTCAAGGGTTTCTGATAATCTGGTTCCAGCAATGCCGCAGGATTTGTCCGAACAAGACCTTGATGATCCTGACGCTGAGTTTGAGGAGCTTGATCCCACAGGTCGATATGGTCGGTACAAGGAAATTTTAGGGAAGGGGGCTTTCAAGAAAGTATATAGAGCATTTGATGGGTTGGAAGGAATTGAAGTGGCATGGAATCAGGTTAAGGTGGCTGATCTATTGCGTAACAATGATGATTTGGAGCGCCTATATTCAGAAGTTCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAACTTTTCAATTCATGGGTTGACACAAAGAACGAGAACATCAACTTCATTACTGAAATTTTCACGTCGGGGACATTACGCCAATACCGGAAGAAACATAAGCATGTTGACTTGAGAGCACTGAAGAAATGGTCTAAGCAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCACGATCCACCCATTATTCATCGAGATTTAAAGTGTGACAACATTTTTGTCAATGGAAATCATGGTGAGGTTAAAATTGGTGACCTGGGATTGGCTGCCATTCTTCAACAGGCCAATTCAGCTCACAGTGTTATAGGTACCCCAGAGTTTATGGCCCCTGAGCTTTATGAAGAAGAATACAACGAGCTTGTTGACGTCTATGCTTTCGGCATGTGCTTGCTAGAGTTGGTGACTGTGGAGTATCCATATGTTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCACTGGCAAAGGTAGCAGATCCTGGAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTATCCGAGAGACTATCTGCAAAAGAACTCTTAATGGATCCCTTTCTTCAGCCTGTTGGAAGTGATGATATAGGTCGTTATTTAATACCCCAGACCCATGATTTAGATATAGGACATAGTAGCCATCATGCTATCGGTGAATATGCTCAAGAAAATTCTGCCGAGACTGGTAGGGAATTCAAAGTGGAAGGTCAAAGGAGAGATATCAATACTATATTTTTGAAACTGCGAATAGTAGACTTGACAGGTCATATTCGCAACATTCACTTCCCGTTTGATATTGAAGCTGATACTGCAATTGCTGTTGCTCGTGAAATGGTCGAGGAGTTAGAACTCACGGATCAAGACGTTACTACTATTGCTCGGATGATTGACTTAGAAATTCAGTATCTCTTTCCAGACTGGAATCCTAATGCAACTCCTCTTGCTGATAGGGTTGGTCAGGAATTGGCACTTTCAGATGTCCACACTGAATTTAGAGATGATGCTTCTCCCGGGGGAATGAGTACTTCAGCTTCTATTGCTAGTCTTTCAATGGAAAGATTACCTTCAGGTCGTAACTACTGGAGTGACTCGCCCAGGACTGGTAGAAACTCTCCATTAAGGCCTGGTGCCCCAAAATTGATTAATGAAATGAATGCTGATGAAGGAAGCACAACGGCCAATGGTGCTACTTCGGTAGAACAGCAGGCTGGCAACATTATTGATGGTGATTTTAGTGTAGAAAAGGAATTTAGTGGGATTACTGATTCCCATTCGGGTTGGAGAAGCATGTCTGGGGATTTACAAGCAACCGATGGAGAGTCTCCTCTGATAGGAAAACCTGTAATATTGAATGACACTGAATCAGAATATGTCAGCATAATGGTTGCAAAACTAGAGAAGTTGTTGGTAAAACAGCAAGAGGAGTTAGATGAACTGAAGAGGAAGCATGAATCAGCTGTCTCAGATCTCCTGAAGGAACTTCATCCGGAAATACGTCATAGGGTCGTAAATATTTGCAACCTGGAGATATCGGACAGTGAAAATGTACACTAA 1914 0.4159 MALELDRNLQVFDSRVSDNLVPAMPQDLSEQDLDDPDAEFEELDPTGRYGRYKEILGKGAFKKVYRAFDGLEGIEVAWNQVKVADLLRNNDDLERLYSEVHLLKTLKHKNIIKLFNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSKQILEGLSYLHSHDPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDVYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVADPGVKAFIEKCIANVSERLSAKELLMDPFLQPVGSDDIGRYLIPQTHDLDIGHSSHHAIGEYAQENSAETGREFKVEGQRRDINTIFLKLRIVDLTGHIRNIHFPFDIEADTAIAVAREMVEELELTDQDVTTIARMIDLEIQYLFPDWNPNATPLADRVGQELALSDVHTEFRDDASPGGMSTSASIASLSMERLPSGRNYWSDSPRTGRNSPLRPGAPKLINEMNADEGSTTANGATSVEQQAGNIIDGDFSVEKEFSGITDSHSGWRSMSGDLQATDGESPLIGKPVILNDTESEYVSIMVAKLEKLLVKQQEELDELKRKHESAVSDLLKELHPEIRHRVVNICNLEISDSENVH 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2043 637 Coils Coil 582 613 - -
Bisa08g2043 637 CDD STKc_WNK 48 308 - -
Bisa08g2043 637 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 366 418 IPR024678 GO:0004674|GO:0005524
Bisa08g2043 637 ProSiteProfiles Protein kinase domain profile. 50 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2043 637 FunFam Probable serine/threonine-protein kinase WNK1 35 131 - -
Bisa08g2043 637 FunFam probable serine/threonine-protein kinase WNK9 133 313 - -
Bisa08g2043 637 MobiDBLite consensus disorder prediction 477 500 - -
Bisa08g2043 637 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 35 530 - -
Bisa08g2043 637 Pfam Protein kinase domain 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2043 637 Gene3D Transferase(Phosphotransferase) domain 1 133 312 - -
Bisa08g2043 637 SMART serkin_6 50 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2043 637 Gene3D - 350 426 - -
Bisa08g2043 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Bisa08g2043 637 SUPERFAMILY Protein kinase-like (PK-like) 52 334 IPR011009 -
Bisa08g2043 637 Gene3D Phosphorylase Kinase; domain 1 34 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2043 Bisa-ChrBisa08 48928210 48932319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2043 40 427 MAP Kinase Kinase Kinase AT3G22420 55.125 1.13e-159 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bisa08g2043 Pkinase 2.7e-51 CL0016