Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2034 ATGCTTGGTCATCTTCTCTGTCGTCCCTCTTCTGAACACACTCCAGAGCATGTCTTGTATAGTTCTCTGTTTCCTGTCAGCAATTCCATTTGCTATGCGAATCAAACTTCCAATGGTTTCCCTCTAGGGTTCTTCTTGAGTAACGGTAGATGCTGGAGTTTTGTGGGTGATGCAGATTTCGAGTATTTCTTTCCCATTATAGCAAAAATGGAATCTGGAAGTGGGTTCTACTCAGTCGATGAGTTCAGATTGGACGCGAAGTGGCTAATTGATCCTAAGCTTCTATATGTCGGACCCAGGATTGGAGAGGGAGCTCATGGCAAAGTCTACGAGGGGAAATATAAAAACCAGACAGTTGCTATTAAAATTTTACACAAAGGAGAAACTCCAGAAGAAATCGCCAAGAGGGAAGCTCGATTTGCAAGGGAGGTGGCAATGTTGTCCAGAGTTCAACATAAGAACTTAGTGAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATTGTCACTGAACTATTATTGGGAGGAACGTTGCGTAAGTATTTGCTTAACATGCGACCAAGATGCTTGGACATACATGTTGCTATTGGTTTCTCCCTTGATATAGCTCGTGCCATGGAGTGCCTGCATTCTCATGGGATCATCCACCGTGACCTGAAACCTGAAAACTTACTCTTAACTGAAGACCAGAAAACGGTCAAGCTAGCAGATTTTGGCTTAGCAAGAGAGGAGTCATTGACAGAGATGATGACCGCTGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGCACTGTCACGCTGAGGCAGGGAGAGAAAAAGCATTACAACCATAAAGTGGATGCTTATAGTTTTGCAATTGTGCTGTGGGAGCTCTTACATAACAAACTACCATTTGAAGGCATGTCAAATCTCCAGGCAGCTTATGCAGCAGCCTTTAAAAACGTAAGACCCAGTGCAGAGAATCTCGCTGAAGAATTGGCTGTAATTCTGACTTCATGCTGGCGAGAGGACCCAAATGCGCGGCCCAACTTCACCCAAATAATACAAATGCTCCTCAATTATCTTTGCACTGTTTCACCTCCTAAACCAATCATTCCCTCAAGGATATTCACTTCTGAGAACCCTGTCTTTTCACCGGACTCCCCAGGTACAAGCTCTTTGATGGCAAAATTTGACAACACAGGGGATACTCCCAGAGGAAAGGAGGAACTTCAGCCTAAAGGTTTTCTTTGCTGCTTCAGTCAATGTTATTAA 1266 0.4408 MLGHLLCRPSSEHTPEHVLYSSLFPVSNSICYANQTSNGFPLGFFLSNGRCWSFVGDADFEYFFPIIAKMESGSGFYSVDEFRLDAKWLIDPKLLYVGPRIGEGAHGKVYEGKYKNQTVAIKILHKGETPEEIAKREARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDIHVAIGFSLDIARAMECLHSHGIIHRDLKPENLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLAEELAVILTSCWREDPNARPNFTQIIQMLLNYLCTVSPPKPIIPSRIFTSENPVFSPDSPGTSSLMAKFDNTGDTPRGKEELQPKGFLCCFSQCY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2034 421 SUPERFAMILY Protein kinase-like (PK-like) 88 384 IPR011009 -
Bisa08g2034 421 ProSitePatterns Protein kinases ATP-binding region signature. 101 122 IPR017441 GO:0005524
Bisa08g2034 421 Pfam Protein tyrosine and serine/threonine kinase 98 355 IPR001245 GO:0004672|GO:0006468
Bisa08g2034 421 CDD STKc_MAP3K-like 101 355 - -
Bisa08g2034 421 SMART serkin_6 95 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2034 421 PRINTS Tyrosine kinase catalytic domain signature 171 184 IPR001245 GO:0004672|GO:0006468
Bisa08g2034 421 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Bisa08g2034 421 PRINTS Tyrosine kinase catalytic domain signature 326 348 IPR001245 GO:0004672|GO:0006468
Bisa08g2034 421 PRINTS Tyrosine kinase catalytic domain signature 209 227 IPR001245 GO:0004672|GO:0006468
Bisa08g2034 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Bisa08g2034 421 Gene3D Transferase(Phosphotransferase) domain 1 176 363 - -
Bisa08g2034 421 FunFam Kinase suppressor of Ras 1 84 174 - -
Bisa08g2034 421 FunFam serine/threonine-protein kinase HT1 176 375 - -
Bisa08g2034 421 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 88 355 - -
Bisa08g2034 421 ProSiteProfiles Protein kinase domain profile. 95 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2034 421 Gene3D Phosphorylase Kinase; domain 1 83 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2034 Bisa-ChrBisa08 48808057 48814543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2034 78 421 MAP Kinase Kinase Kinase AT5G50180 80.814 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa08g2034 PK_Tyr_Ser-Thr 1.9e-58 CL0016