Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2029 ATGGCCTCCACCTTCACGTCTCTAGGTTTCAAAGCTCCGACTCTAGATCCGTCTCCTCTCTCTCAGAACTTTCCCTTTTGTTCTTTTCTTCAAACTCACTCTCATCAACTAACTCAAGCCATGGAATCCAAACACAGAACCACCATTAAGTTCCTCTGTAGCTACGGCGGCAAAATCCTTCCTCGCGCCACTGACGGCAACCTTCGCTACGTCGGCGGCCACACCAGGGTACTCGCCGTTCATCCTTCTATTTTCTACTCAGAGCTGATGGTGAAGCTGGCGGAATTCTGTGGTTCGTCTGTGACCTTGAAGTGTTCATTGCCTAACGGAGACCTGGAGACGTTGATTTCGATAACAAGCGACGAGGATTTGGCCAATATAATCGAGGAATACGATCGGGCCTCGTCGTCGCTAGCTTATCCGTTGAAGGTCAGAGCTATTCTCTTGCCGCCGAAGTCTCTCAAGAAAGTGTCTCCTTCTCCGTCCTCGGCTCCGAGCGCCGACCATTCTCCGTCCAGATCGACGAACTCGTCCACCGATTCGCTTCCTTCTACCTCGACTTATCGCTTCGTCCGTCCCGTTGCGTATCCAGTTGGAGTCCGTAACGGCTCGGGAAAAGCGTGCTGCTACACCCGACAGTTCGACGGAAGCCCTAGATTCTTTTATTGTGGATCCCGCTGCAACTATTTCTGTTACTGA 699 0.5165 MASTFTSLGFKAPTLDPSPLSQNFPFCSFLQTHSHQLTQAMESKHRTTIKFLCSYGGKILPRATDGNLRYVGGHTRVLAVHPSIFYSELMVKLAEFCGSSVTLKCSLPNGDLETLISITSDEDLANIIEEYDRASSSLAYPLKVRAILLPPKSLKKVSPSPSSAPSADHSPSRSTNSSTDSLPSTSTYRFVRPVAYPVGVRNGSGKACCYTRQFDGSPRFFYCGSRCNYFCY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2029 232 SUPERFAMILY CAD & PB1 domains 65 157 - -
Bisa08g2029 232 Pfam PB1 domain 65 135 IPR000270 GO:0005515
Bisa08g2029 232 SMART PB1_new 63 151 IPR000270 GO:0005515
Bisa08g2029 232 MobiDBLite consensus disorder prediction 154 185 - -
Bisa08g2029 232 PANTHER OS05G0427100 PROTEIN-RELATED 41 182 - -
Bisa08g2029 232 CDD PB1_UP2 52 148 - -
Bisa08g2029 232 Gene3D - 69 145 - -
Bisa08g2029 232 MobiDBLite consensus disorder prediction 156 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2029 Bisa-ChrBisa08 48729056 48729844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2029 48 200 MAP Kinase Kinase Kinase AT1G04700 36.601 3.87e-26 104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2029 08 48729056 48729844 Bisa02g1248 02 20868619 20869276 CCT
Bisa08g2029 08 48729056 48729844 Bisa08g2029 08 48729056 48729844 ECH