Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2023 ATGACCAAAGACTCCAACCAGTACTCCTTCGGCCGAGCCTTCTTCCCCACCAAGCTCCCCATGAAACCCTCCTCCAATTCCTCCAACATCTCCTCCTTTTCCACCTCCTTCGTATTCTCCATCTTGTCCCCGATCTCCTCCAGCCCTGGCTTCGGCCTCTCCTTCGTCCTCACCAACACCATGAATCCTCCCGGCGCCCTCGCCAGCCAGTACTTCGGCCTCTTCACCAACCCCTCGGTCATCCCCGTCAATCCCCTGCTCGCGGTCGAATTCGACACCGGACAGAACCCGGAGTTCAATGATCCCGACGATAACCACATAGGAATCGATTTAAACAACATTGAATCCATCTTCCTCAGACCAGCCGGCTATTACAACTCCACCGGTGGCTTCGTGCCTATTCGTATGCGCAATGGTCAGAACGTTCGAGCTTGGGTCGACTTCGATGGCACAAATCTCGAGATCAATGTTACAATCGCGCCAATCGGCATTCAACGCCCGTCTAGGCCGACGCTTTCGTATAAAAATCCCGTTGTAGCTAATTTCTTCTCCGCAGAAATGTATGTAGGGTTTTCGGCATCGAAGACGAAGTTCGCTGAAGCACAGAGACTTATCGCTTGGAGCTTGAGTGATACTGGCCCTGCGAGAGAGATCAACACAACGAATTTGCCAGTATTTCGGTTAGAATCATCGTCTAAAAAGCTTTCTAGTGGAGCAATTGCTGGGATTGTGATAGGATGTGTTGCTTTTGTGGTAATTTGTGCTTCTGGGTTTTTCTTATTGTGGCAAAACAACAGATTGAAAGACCAAGAAGACGAAATTGAAGATTGGGAACTAGAGTACTGGCCTCACAGATTCTCCTACGAGGAGCTCAGGGTGGCTACTGTTGAATTCAGCAAGGAAAATCTGTTAGGTTCAGGAGGATTCGGAAGAGTGTATAAGGGAATAGTTTCGAACAAAACAGAAATTGCAGTGAAATGCGTGAACCACGATTCCAAACAGGGGTTGCGAGAATTCATGGCGGAGATTTCAAGCATGGGAAGGCTGCAACACAAGAATCTGGTTCAAATGCGAGGATGGTGCAGAAAAGGGAACGAGCTTATGCTTGTGTACGATTATATGCTCAATGGAAGTCTGAACAAGTGGATCTTCGGTAAGCCCGCGAAGCTTCTGGGTTGGGAACTACGTCGTCGGATCCTCGTCGACGTCGCGGAGGGGCTGCACTATCTTCATCATGGATGGGACCAAGTGGTGATTCACAGGGACATTAAATCGAGCAATATATTGCTGGATTCGGAGATGAGAGGAAGATTGGGAGATTTTGGGCTGGCGAAGCTTTACCAACAAGGTGAAGTGCCGAATACGACAAGGGTGGTGGGTAGGTTGGGGTATTTGGCGCCGGAGCTGGCAACGGTGTCTGCGCCGACGTCGGCGAGCGACGTGTACAGCTTCGGAGTGGTGCTGTTGGAGGTAGCGTGTGGACGGAGACCGATAGAGACTTCGGCGCCGGAGGAAGAGATGGTGCTGATTGATTGGGTGAGGGATTTGTACGCGAAAGGGAGCGCCGGCGTGGCGGCGGATCAGAGGATTGAGGGGGAGTACGATGAGGGAGACATGGAAATTGTGTTGAAGCTTGGTTTGGCTTGTTGTCATCCTGATCCGCAGAGAAGGCCGACCATGAAGGAGGTGGTTGTGCTTTTGGTTGGGGAGGAAGTTGCGGCGGCGCCGGCCGAATTGTTGTCGGAGCTGGCTCGAGGCGAAAGCGGCACCGTGGACAGTGTCGACGACGGCGAATTACACGAGACGGCGCCATTAAGAACCACTCATGTGGTATGA 1836 0.5169 MTKDSNQYSFGRAFFPTKLPMKPSSNSSNISSFSTSFVFSILSPISSSPGFGLSFVLTNTMNPPGALASQYFGLFTNPSVIPVNPLLAVEFDTGQNPEFNDPDDNHIGIDLNNIESIFLRPAGYYNSTGGFVPIRMRNGQNVRAWVDFDGTNLEINVTIAPIGIQRPSRPTLSYKNPVVANFFSAEMYVGFSASKTKFAEAQRLIAWSLSDTGPAREINTTNLPVFRLESSSKKLSSGAIAGIVIGCVAFVVICASGFFLLWQNNRLKDQEDEIEDWELEYWPHRFSYEELRVATVEFSKENLLGSGGFGRVYKGIVSNKTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMLNGSLNKWIFGKPAKLLGWELRRRILVDVAEGLHYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGRLGYLAPELATVSAPTSASDVYSFGVVLLEVACGRRPIETSAPEEEMVLIDWVRDLYAKGSAGVAADQRIEGEYDEGDMEIVLKLGLACCHPDPQRRPTMKEVVVLLVGEEVAAAPAELLSELARGESGTVDSVDDGELHETAPLRTTHVV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2023 611 Gene3D Phosphorylase Kinase; domain 1 262 373 - -
Bisa08g2023 611 CDD lectin_legume_LecRK_Arcelin_ConA 1 213 IPR001220 GO:0030246
Bisa08g2023 611 ProSiteProfiles Protein kinase domain profile. 298 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2023 611 MobiDBLite consensus disorder prediction 587 611 - -
Bisa08g2023 611 Gene3D - 1 233 - -
Bisa08g2023 611 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Bisa08g2023 611 PANTHER - 7 570 - -
Bisa08g2023 611 CDD STKc_IRAK 304 561 - -
Bisa08g2023 611 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Bisa08g2023 611 FunFam L-type lectin-domain containing receptor kinase S.4 374 579 - -
Bisa08g2023 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Bisa08g2023 611 SMART serkin_6 298 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2023 611 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 216 IPR013320 -
Bisa08g2023 611 Pfam Protein kinase domain 299 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2023 611 ProSitePatterns Legume lectins beta-chain signature. 87 93 IPR019825 -
Bisa08g2023 611 Pfam Legume lectin domain 1 223 IPR001220 GO:0030246
Bisa08g2023 611 FunFam L-type lectin-domain containing receptor kinase S.1 283 373 - -
Bisa08g2023 611 Coils Coil 260 280 - -
Bisa08g2023 611 SUPERFAMILY Protein kinase-like (PK-like) 273 567 IPR011009 -
Bisa08g2023 611 MobiDBLite consensus disorder prediction 589 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2023 Bisa-ChrBisa08 48625646 48627481 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2023 1 569 Receptor kinase-like Gene Family AT1G15530 68.761 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa08g2023 Pkinase 8e-50 CL0016